RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 FXYD4P59646 89 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 ZNF90Q03938 601 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 TESK1Q15569 626 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 ACKR1Q16570 336 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 SGCBQ16585 318 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 C5orf64Q2M2E5 130 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 MPV17L2Q567V2 206 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 TCTEX1D4Q5JR98 221 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 TXNDC8Q6A555 127 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 UFSP1Q6NVU6 142 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 C1orf122Q6ZSJ8 110 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 SOCS4Q8WXH5 440 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 FOXN4Q96NZ1 517 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 GNB4Q9HAV0 340 aa10.67□□□□□ -0.7
USP3-203ENST00000538686 UBE2J1Q9Y385 318 aaPredicted RBP10.67□□□□□ -0.7
USP3-203ENST00000538686 TMEM265A0A087WTH1 108 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 G3V3Y1 287 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 K7ESM1 405 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 TMEM50AO95807 157 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 HAND1O96004 215 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 CA2P00918 260 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 C1QTNF9P0C862 333 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 SRD5A2P31213 254 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 OPRM1P35372 400 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 RAB9AP51151 201 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 UEVLDQ8IX04 471 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 SELENOHQ8IZQ5 122 aaKnown RBP10.66□□□□□ -0.7
USP3-203ENST00000538686 ZNF721Q8TF20 911 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 SPACA5Q96QH8 159 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 LIME1Q9H400 295 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 MBNL1Q9NR56 388 aaKnown RBP10.66□□□□□ -0.7
USP3-203ENST00000538686 IL36BQ9NZH7 164 aa10.66□□□□□ -0.7
USP3-203ENST00000538686 LOC101059948A0A1B0GTJ6 334 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 ALG1L2C9J202 215 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 HLA-DRB1P01911 266 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 SMIM10L1P0DMW3 83 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 SLC25A6P12236 298 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 AZU1P20160 251 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 PMCHP20382 165 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 PAX9P55771 341 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 GFRA1P56159 465 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 POU3F1Q03052 451 aaPredicted RBP10.65□□□□□ -0.7
USP3-203ENST00000538686 ATG2AQ2TAZ0 1938 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 NMSQ5H8A3 153 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 OTPQ5XKR4 325 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 STXBP6Q8NFX7 210 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 SMIM10Q96HG1 83 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 TXNDC17Q9BRA2 123 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 LRRC61Q9BV99 259 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 GPR27Q9NS67 375 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 CENPMQ9NSP4 180 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 PLEK2Q9NYT0 353 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 KLHL13Q9P2N7 655 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 CD207Q9UJ71 328 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 COA3Q9Y2R0 106 aaPredicted RBP10.65□□□□□ -0.7
USP3-203ENST00000538686 TRAV36DV7A0A075B6V5 113 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 SOX1O00570 391 aaPredicted RBP10.65□□□□□ -0.7
USP3-203ENST00000538686 LINC00869P0C866 280 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 CCNOP22674 350 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 RAC3P60763 192 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 PHYHD1Q5SRE7 291 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 ZNF324BQ6AW86 544 aaPredicted RBP10.65□□□□□ -0.7
USP3-203ENST00000538686 UBALD2Q8IYN6 164 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 ZNF525Q8N782 197 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 OR10G8Q8NGN5 311 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 EAF1Q96JC9 268 aaPredicted RBP10.65□□□□□ -0.7
USP3-203ENST00000538686 CCDC3Q9BQI4 270 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 SFXN3Q9BWM7 321 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 TAAR3PQ9P1P4 343 aa10.65□□□□□ -0.7
USP3-203ENST00000538686 TRPM6Q9BX84 2022 aa10.65□□□□□ -0.71
USP3-203ENST00000538686 C11orf98E9PRG8 122 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 NUDT3O95989 172 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 CT62P0C5K7 136 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 IGLL1P15814 213 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 CRYBA4P53673 196 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 CKS1BP61024 79 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 RNPS1Q15287 305 aaKnown RBP10.64□□□□□ -0.71
USP3-203ENST00000538686 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.64□□□□□ -0.71
USP3-203ENST00000538686 VN1R4Q7Z5H5 301 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 SCCPDHQ8NBX0 429 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 OR2M3Q8NG83 312 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 OR10G3Q8NGC4 313 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 FOXQ1Q9C009 403 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 SNURFLB1AK76 121 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 C11orf94C9JXX5 98 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 NUDT14O95848 222 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 NTSR1P30989 418 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 ZNF83P51522 516 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 RRADP55042 308 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 OR8B8Q15620 311 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 ASTLQ6HA08 431 aaPredicted RBP10.64□□□□□ -0.71
USP3-203ENST00000538686 COLCA1Q6ZS62 124 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 CMTM8Q8IZV2 173 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 OR10V1Q8NGI7 309 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 OR5A1Q8NGJ0 315 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 DOK4Q8TEW6 326 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 COX14Q96I36 57 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 AP1S3Q96PC3 154 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 PLA2G3Q9NZ20 509 aa10.64□□□□□ -0.71
USP3-203ENST00000538686 TRAV8-6A0A0B4J262 113 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms