RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 JPT1Q9UK76 154 aa17.07■□□□□ 0.32
CCDC78-215ENST00000538176 IGHV3-43A0A0B4J1X8 118 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 TMEM14DPA8MWL7 114 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 IGHV3-43DP0DP04 118 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 CHATP28329 748 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 VHLP40337 213 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 NKAPLQ5M9Q1 402 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 OR2W3Q7Z3T1 314 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 TGIF2LXQ8IUE1 241 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 PRR18Q8N4B5 295 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 C5orf56Q8N8D9 126 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 ZNF439Q8NDP4 499 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 CHPT1Q8WUD6 406 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 GALMQ96C23 342 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 PLGRKTQ9HBL7 147 aa17.06■□□□□ 0.32
CCDC78-215ENST00000538176 TCRBV4S1A1TA0A5B7 111 aa17.05■□□□□ 0.32
CCDC78-215ENST00000538176 YPEL1O60688 119 aa17.05■□□□□ 0.32
CCDC78-215ENST00000538176 MRPS14O60783 128 aaKnown RBP17.05■□□□□ 0.32
CCDC78-215ENST00000538176 ARSBP15848 533 aa17.05■□□□□ 0.32
CCDC78-215ENST00000538176 HNF4GQ14541 408 aa17.05■□□□□ 0.32
CCDC78-215ENST00000538176 TBCEQ15813 527 aaPredicted RBP17.05■□□□□ 0.32
CCDC78-215ENST00000538176 MORN2Q502X0 79 aa17.05■□□□□ 0.32
CCDC78-215ENST00000538176 TMEM91Q6ZNR0 172 aa17.05■□□□□ 0.32
CCDC78-215ENST00000538176 OR1L1Q8NH94 360 aa17.05■□□□□ 0.32
CCDC78-215ENST00000538176 UBALD1Q8TB05 177 aa17.05■□□□□ 0.32
CCDC78-215ENST00000538176 MRPL30Q8TCC3 161 aaKnown RBP17.05■□□□□ 0.32
CCDC78-215ENST00000538176 EAF1Q96JC9 268 aaPredicted RBP17.05■□□□□ 0.32
CCDC78-215ENST00000538176 YPEL2Q96QA6 119 aa17.05■□□□□ 0.32
CCDC78-215ENST00000538176 PLEKHJ1Q9NW61 149 aa17.05■□□□□ 0.32
CCDC78-215ENST00000538176 ABRACLQ9P1F3 81 aa17.05■□□□□ 0.32
CCDC78-215ENST00000538176 ADARB2-AS1A8MUL3 147 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 SLC17A2O00624 439 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 MOSP00540 346 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 QRFPP83859 136 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 CT45A1Q5HYN5 189 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 FOXRED2Q8IWF2 684 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 LYG1Q8N1E2 194 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 COMMD1Q8N668 190 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 CT45A3Q8NHU0 189 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 CNBD2Q96M20 576 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 GON7Q9BXV9 100 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 MGAT4AQ9UM21 535 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 NOTCH1P46531 2555 aa17.04■□□□□ 0.32
CCDC78-215ENST00000538176 PSMB11A5LHX3 300 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 LANCL1O43813 399 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 IGHG2P01859 326 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 BLVRBP30043 206 aaPredicted RBP17.03■□□□□ 0.32
CCDC78-215ENST00000538176 REG1BP48304 166 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 ZNF134P52741 427 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 RPS25P62851 125 aaKnown RBP17.03■□□□□ 0.32
CCDC78-215ENST00000538176 SLC35B1P78383 322 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 UNC119Q13432 240 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 FBLN7Q53RD9 439 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 OR10K2Q6IF99 312 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 ZNF367Q7RTV3 350 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 FAM89BQ8N5H3 189 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 SULT4A1Q9BR01 284 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 FAAP24Q9BTP7 215 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 GHITMQ9H3K2 345 aa17.03■□□□□ 0.32
CCDC78-215ENST00000538176 LIN7CQ9NUP9 197 aaKnown RBP17.03■□□□□ 0.32
CCDC78-215ENST00000538176 PLXNB1O43157 2135 aa17.02■□□□□ 0.32
CCDC78-215ENST00000538176 NCBP2LA6PVI3 153 aaKnown RBP17.02■□□□□ 0.32
CCDC78-215ENST00000538176 PF4V1P10720 104 aa17.02■□□□□ 0.32
CCDC78-215ENST00000538176 MOB1BQ7L9L4 216 aa17.02■□□□□ 0.32
CCDC78-215ENST00000538176 C6orf201Q7Z4U5 140 aa17.02■□□□□ 0.32
CCDC78-215ENST00000538176 SLC35E3Q7Z769 313 aa17.02■□□□□ 0.32
CCDC78-215ENST00000538176 Q8N6K4 173 aa17.02■□□□□ 0.32
CCDC78-215ENST00000538176 OR10V1Q8NGI7 309 aa17.02■□□□□ 0.32
CCDC78-215ENST00000538176 STEAP1Q9UHE8 339 aa17.02■□□□□ 0.32
CCDC78-215ENST00000538176 HSF4Q9ULV5 492 aa17.02■□□□□ 0.32
CCDC78-215ENST00000538176 AK6Q9Y3D8 172 aaKnown RBP17.02■□□□□ 0.32
CCDC78-215ENST00000538176 SERPINE3A8MV23 424 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 PDCD5O14737 125 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 NAPSAO96009 420 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 CALRP27797 417 aaKnown RBP17.01■□□□□ 0.31
CCDC78-215ENST00000538176 SLC6A1P30531 599 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 HMGN3Q15651 99 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 RAB11BQ15907 218 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 KPRPQ5T749 579 aaPredicted RBP17.01■□□□□ 0.31
CCDC78-215ENST00000538176 SAMD5Q5TGI4 173 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 HIST2H2BDQ6DRA6 164 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 WFDC9Q8NEX5 89 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 ABHD14AQ9BUJ0 271 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 ABCG5Q9H222 651 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 Q9H521 79 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 ZFP57Q9NU63 452 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 V9GY05 133 aa17.01■□□□□ 0.31
CCDC78-215ENST00000538176 TRBV6-6A0A0A6YYG2 114 aa17■□□□□ 0.31
CCDC78-215ENST00000538176 SH2D7A6NKC9 451 aaPredicted RBP17■□□□□ 0.31
CCDC78-215ENST00000538176 SLC31A2O15432 143 aa17■□□□□ 0.31
CCDC78-215ENST00000538176 GALP22466 123 aa17■□□□□ 0.31
CCDC78-215ENST00000538176 MAP2K4P45985 399 aa17■□□□□ 0.31
CCDC78-215ENST00000538176 GABARAPL2P60520 117 aa17■□□□□ 0.31
CCDC78-215ENST00000538176 FABP5Q01469 135 aa17■□□□□ 0.31
CCDC78-215ENST00000538176 TCTEX1D4Q5JR98 221 aa17■□□□□ 0.31
CCDC78-215ENST00000538176 REC114Q7Z4M0 266 aa17■□□□□ 0.31
CCDC78-215ENST00000538176 RASL11BQ9BPW5 248 aa17■□□□□ 0.31
CCDC78-215ENST00000538176 LPAR5Q9H1C0 372 aa17■□□□□ 0.31
CCDC78-215ENST00000538176 CHMP1AQ9HD42 196 aaPredicted RBP17■□□□□ 0.31
CCDC78-215ENST00000538176 CMYA5Q8N3K9 4069 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms