RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 TMEM59Q9BXS4 323 aa11.86□□□□□ -0.51
LRRK1-211ENST00000538064 TSSC4Q9Y5U2 329 aaPredicted RBP11.86□□□□□ -0.51
LRRK1-211ENST00000538064 A0A1W2PRX2 142 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 TRIM64CA6NLI5 447 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 AIPO00170 330 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 SDCBPO00560 298 aaPredicted RBP11.85□□□□□ -0.51
LRRK1-211ENST00000538064 HSD17B6O14756 317 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 ORC5O43913 435 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 GLAP06280 429 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 TMEM11P17152 192 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 ZNF816Q0VGE8 651 aaPredicted RBP11.85□□□□□ -0.51
LRRK1-211ENST00000538064 OR2W3Q7Z3T1 314 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 REC114Q7Z4M0 266 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 TPRA1Q86W33 373 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 LINC00311Q8N616 119 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 OR4X2Q8NGF9 303 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 Q96M66 194 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 GFI1Q99684 422 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 OR51E2Q9H255 320 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 GFOD1Q9NXC2 390 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 STEAP1Q9UHE8 339 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 PEX16Q9Y5Y5 336 aa11.85□□□□□ -0.51
LRRK1-211ENST00000538064 LOC100506127A0A0U1RQW1 187 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 A0A1W2PPE3 182 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 TCRBV4S1A1TA0A5B7 111 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 IFITM5A6NNB3 132 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 TMEM14DPA8MWL7 114 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 FGF16O43320 207 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 MT-ND4P03905 459 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 PF4V1P10720 104 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 FUT3P21217 361 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 GADD45AP24522 165 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 LOXL3P58215 753 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 RPS27AP62979 156 aaKnown RBP11.84□□□□□ -0.51
LRRK1-211ENST00000538064 HES1Q14469 280 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 P2RY14Q15391 338 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 Q3ZCU0 254 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 C9orf152Q5JTZ5 239 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 HES5Q5TA89 166 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 OR10K2Q6IF99 312 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 RAB12Q6IQ22 244 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 IZUMO1Q8IYV9 350 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 C5orf56Q8N8D9 126 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 OR51D1Q8NGF3 324 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 ARL11Q969Q4 196 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 FAM3DQ96BQ1 224 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 NEDD4LQ96PU5 975 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 TM2D1Q9BX74 207 aa11.84□□□□□ -0.51
LRRK1-211ENST00000538064 SHISA3A0PJX4 238 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 NOTOA8MTQ0 251 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 PDCD6O75340 191 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 CA11O75493 328 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 IGKV1D-33P01593 117 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 IGKV1-33P01594 117 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 IL3RAP26951 378 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 CLDN12P56749 244 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 OR10A3P58181 314 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 QRFPP83859 136 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 C2orf76Q3KRA6 126 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 TMEM30BQ3MIR4 351 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 OXLD1Q5BKU9 147 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 C10orf99Q6UWK7 81 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 GAPTQ8N292 157 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 CCDC107Q8WV48 283 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 RAB9BQ9NP90 201 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 ETAA1Q9NY74 926 aa11.83□□□□□ -0.52
LRRK1-211ENST00000538064 IGHV1-3A0A0C4DH29 117 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 PSMB11A5LHX3 300 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 C12orf77C9JDV5 145 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 AIREO43918 545 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 GAPDHP04406 335 aaKnown RBP11.82□□□□□ -0.52
LRRK1-211ENST00000538064 UNC119Q13432 240 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 EBI3Q14213 229 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 NKAPLQ5M9Q1 402 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 C6orf183Q5T699 404 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 TRAT1Q6PIZ9 186 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 WFDC9Q8NEX5 89 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 UBALD1Q8TB05 177 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 PHF21AQ96BD5 680 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 YIPF6Q96EC8 236 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 MRPS26Q9BYN8 205 aaKnown RBP11.82□□□□□ -0.52
LRRK1-211ENST00000538064 RAB22AQ9UL26 194 aa11.82□□□□□ -0.52
LRRK1-211ENST00000538064 IGHV3-43A0A0B4J1X8 118 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 SPINT2O43291 252 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 PF4P02776 101 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 PRB2P02812 416 aaPredicted RBP11.81□□□□□ -0.52
LRRK1-211ENST00000538064 IGHV3-43DP0DP04 118 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 CD33P20138 364 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 SDC2P34741 201 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 REG1BP48304 166 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 KHDC1LQ5JSQ8 128 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 FAM53AQ6NSI3 398 aaPredicted RBP11.81□□□□□ -0.52
LRRK1-211ENST00000538064 Q8N6K4 173 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 RTN4IP1Q8WWV3 396 aaPredicted RBP11.81□□□□□ -0.52
LRRK1-211ENST00000538064 ST6GALNAC6Q969X2 333 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 CENPOQ9BU64 300 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 LPAR5Q9H1C0 372 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 KCNK15Q9H427 330 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 NECAP2Q9NVZ3 263 aa11.81□□□□□ -0.52
LRRK1-211ENST00000538064 TRAPPC2LQ9UL33 140 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms