RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 COMPP49747 757 aaPredicted RBP9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 EFNA3P52797 238 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 EXT1Q16394 746 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 PLA2G2CQ5R387 149 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 COMMD2Q86X83 199 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 OR4C5Q8NGB2 326 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 MOB1AQ9H8S9 216 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 PLEKHJ1Q9NW61 149 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 IGKV1-9A0A0C4DH69 117 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 A0A0U1RQV5 110 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 DUXBA0A1W2PPF3 345 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 ANKUB1A6NFN9 424 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 TMEM238C9JI98 176 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 TMEM250H0YL14 139 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 GALR2O43603 387 aaPredicted RBP9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 MMP23AO75900 390 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 ZNF17P17021 662 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 AADACP22760 399 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 CTRLP40313 264 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 SLC6A8P48029 635 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 MEF2BQ02080 365 aaPredicted RBP9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 FMODQ06828 376 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 CXorf66Q5JRM2 361 aaPredicted RBP9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 ABHD12BQ7Z5M8 362 aaPredicted RBP9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 OR11L1Q8NGX0 322 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 HSPB9Q9BQS6 159 aa9.76□□□□□ -0.85
SEMA4D-221ENST00000537934 A0A1B0GX78 115 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 OR6C6A6NF89 314 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 F6UZH7 168 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 ZNF133P52736 654 aaPredicted RBP9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 EIF3IQ13347 325 aaKnown RBP9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 KISS1Q15726 138 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 FBLN7Q53RD9 439 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 CALHM1Q8IU99 346 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 RPUSD4Q96CM3 377 aaKnown RBP9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 VSIRQ9H7M9 311 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 OCIAD1Q9NX40 245 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 PTRH2Q9Y3E5 179 aaKnown RBP9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 CPAMD8Q8IZJ3 1885 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 IGHV2OR16-5A0A0B4J2B6 119 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 A0A0U1RQK1 487 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 C3orf85A0A1B0GTC6 90 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 ZNF320A2RRD8 509 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 HLA-HP01893 362 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 NPBWR2P48146 333 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 IGLV3-21P80748 117 aaPredicted RBP9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 ID3Q02535 119 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 CDCP2Q5VXM1 449 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 SHISA6Q6ZSJ9 500 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 FAM57BQ71RH2 274 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 OR5AU1Q8NGC0 362 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 LOXL4Q96JB6 756 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 SLC46A1Q96NT5 459 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 OR10A5Q9H207 317 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 PARLQ9H300 379 aa9.75□□□□□ -0.85
SEMA4D-221ENST00000537934 ZNF205O95201 554 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 GYPAP02724 150 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 FBLP22087 321 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 CRIP3Q6Q6R5 217 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 TMEM144Q7Z5S9 345 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 ZNF709Q8N972 641 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 PLPPR1Q8TBJ4 325 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 DGAT2Q96PD7 388 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 TMEM222Q9H0R3 208 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 LAMA5O15230 3695 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 IGKV1D-43A0A0B4J1Z2 117 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 NTN3O00634 580 aaPredicted RBP9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 CDX4O14627 284 aaPredicted RBP9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 CHST1O43916 411 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 VENTXO95231 258 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 OPN1LWP04000 364 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 BMP5P22003 454 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 DTYMKP23919 212 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 DUSP3P51452 185 aaPredicted RBP9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 HNRNPA3P51991 378 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 RRADP55042 308 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 RPL19P84098 196 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 FAM78BQ5VT40 261 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 SCGB1C1Q8TD33 95 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 FAM71F1Q96KD3 344 aaPredicted RBP9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 TMEM56Q96MV1 263 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 RNF2Q99496 336 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 PSMG3Q9BT73 122 aaPredicted RBP9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 RSG1Q9BU20 258 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 ZNF286AQ9HBT8 521 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 TP53TG3Q9ULZ0 132 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 ST3GAL6Q9Y274 331 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 TMEM56-RWDD3S4R434 201 aa9.74□□□□□ -0.85
SEMA4D-221ENST00000537934 MUC6Q6W4X9 2439 aa9.73□□□□□ -0.85
SEMA4D-221ENST00000537934 M0QZ24 198 aa9.73□□□□□ -0.85
SEMA4D-221ENST00000537934 MPPED1O15442 326 aa9.73□□□□□ -0.85
SEMA4D-221ENST00000537934 PRKNO60260 465 aaPredicted RBP9.73□□□□□ -0.85
SEMA4D-221ENST00000537934 SCRG1O75711 98 aa9.73□□□□□ -0.85
SEMA4D-221ENST00000537934 UTS2O95399 124 aa9.73□□□□□ -0.85
SEMA4D-221ENST00000537934 IGLC2P0DOY2 106 aa9.73□□□□□ -0.85
SEMA4D-221ENST00000537934 IGLC3P0DOY3 106 aa9.73□□□□□ -0.85
SEMA4D-221ENST00000537934 HLA-DOBP13765 273 aa9.73□□□□□ -0.85
SEMA4D-221ENST00000537934 CCL1P22362 96 aa9.73□□□□□ -0.85
SEMA4D-221ENST00000537934 MDH2P40926 338 aaKnown RBP9.73□□□□□ -0.85
SEMA4D-221ENST00000537934 RPS20P60866 119 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms