RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SERF1AO75920 110 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 DBHP09172 617 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 LRRC10Q5BKY1 277 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 SPIN3Q5JUX0 258 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 STUMQ69YW2 141 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 FAM58AQ8N1B3 248 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 ARHGAP5-AS1Q96IT6 56 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 FBLN5Q9UBX5 448 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 KIF26AQ9ULI4 1882 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 SEC16AO15027 2179 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 SOCS1O15524 211 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 GPR75O95800 540 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 EXOSC7Q15024 291 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 FFAR4Q5NUL3 377 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 PRSS57Q6UWY2 283 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 METTL7AQ9H8H3 244 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 MRPL27Q9P0M9 148 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 C19orf53Q9UNZ5 99 aaPredicted RBP9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 RFNGQ9Y644 331 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 IGSF23A1L1A6 192 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 TMEM14DPA8MWL7 114 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 NPIPA5E9PKD4 350 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 TMEM250H0YL14 139 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 SPINT1O43278 529 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 CST7O76096 145 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 PLCXD2Q0VAA5 305 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 RTP5Q14D33 572 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 TMEM252Q8N6L7 170 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 OR52M1Q8NGK5 317 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 LMF2Q9BU23 707 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 SLC39A9Q9NUM3 307 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 NPIPA1Q9UND3 350 aa9.41□□□□□ -0.9
CLSTN3-207ENST00000537408 A0A1B0GUS0 222 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 M0R1X1 148 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 BIDP55957 195 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 TMEM187Q14656 261 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 PMCHL1Q16048 86 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF440Q8IYI8 595 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 ARID1AO14497 2285 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 IGHV2-26A0A0B4J1V2 119 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 SERTM2A0A1B0GWG4 89 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 RBFOX2O43251 390 aaKnown RBP eCLIP9.4□□□□□ -0.92e-6■■■■□ 25.7
CLSTN3-207ENST00000537408 GNG7O60262 68 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 VENTXO95231 258 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 ONECUT2O95948 504 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 CTSBP07858 339 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 CPMP14384 443 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 ADMP35318 185 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 MEF2BQ02080 365 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 CNN3Q15417 329 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 WDR74Q6RFH5 385 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 MARCH3Q86UD3 253 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 OR10W1Q8NGF6 305 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 DDIT4LQ96D03 193 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 BANF2Q9H503 90 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 MOB1AQ9H8S9 216 aa9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 DNAJB12Q9NXW2 375 aaKnown RBP9.4□□□□□ -0.9
CLSTN3-207ENST00000537408 ZNF850A8MQ14 1090 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 CDX4O14627 284 aaPredicted RBP9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 PHF1O43189 567 aaPredicted RBP9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 NUPR1O60356 82 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 PNMTP11086 282 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 AMTP48728 403 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 EMDP50402 254 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 RPS4XP62701 263 aaKnown RBP9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 ROM1Q03395 351 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 GTF2H5Q6ZYL4 71 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 VASH2Q86V25 355 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 WFDC8Q8IUA0 241 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 C20orf196Q8IYI0 205 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 LHX4Q969G2 390 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 ZNF286AQ9HBT8 521 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 FBXO34Q9NWN3 711 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 DLL3Q9NYJ7 618 aa9.4□□□□□ -0.91
CLSTN3-207ENST00000537408 GFERP55789 205 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 RPL15P61313 204 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 FAM71F2Q6NXP2 309 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 CENPVQ7Z7K6 275 aaPredicted RBP9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 OR11L1Q8NGX0 322 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 OR4F5Q8NH21 305 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 OR4F4Q96R69 305 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 RNF115Q9Y4L5 304 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 ASCC3Q8N3C0 2202 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 HEATR5AQ86XA9 2040 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 MDFIC2A0A1B0GVS7 189 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 CDIPTO14735 213 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 TESK1Q15569 626 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 LINC00114Q6XXX2 140 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 OR52N5Q8NH56 324 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 MBD3L1Q8WWY6 194 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 PRRG4Q9BZD6 226 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 IGLC7A0M8Q6 106 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 ISG15P05161 165 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 MC5RP33032 325 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 CTRLP40313 264 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 SLC6A8P48029 635 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 AMMECR1LQ6DCA0 310 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 SLC22A18ASQ8N1D0 253 aa9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 MRPL30Q8TCC3 161 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-207ENST00000537408 ABHD14BQ96IU4 210 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms