RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 VENTXO95231 258 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 GCH1P30793 250 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 CLRN1P58418 232 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 MFAP5Q13361 173 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 RNPS1Q15287 305 aaKnown RBP13.37□□□□□ -0.27
CHFR-213ENST00000536843 SLC25A47Q6Q0C1 308 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 ADPRHL1Q8NDY3 354 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 CMTM2Q8TAZ6 248 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 ORAOV1Q8WV07 137 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 ST8SIA1Q92185 356 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 PINX1Q96BK5 328 aaKnown RBP13.37□□□□□ -0.27
CHFR-213ENST00000536843 WDYHV1Q96HA8 205 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 TRAPPC1Q9Y5R8 145 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 A0A1B0GUS0 222 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 NKX6-3A6NJ46 265 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 KLF3P57682 345 aaPredicted RBP13.36□□□□□ -0.27
CHFR-213ENST00000536843 CCL7P80098 99 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 LRP11Q86VZ4 500 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 ZNF295-AS1Q8N0V1 137 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 EXTL1Q92935 676 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 MANBALQ9NQG1 85 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 ALKBH4Q9NXW9 302 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 TAAR3PQ9P1P4 343 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 PIGLQ9Y2B2 252 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 PAM16Q9Y3D7 125 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 SIT1Q9Y3P8 196 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 ADAMTS20P59510 1910 aa13.36□□□□□ -0.27
CHFR-213ENST00000536843 A0A1W2PQM1 296 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 LIPT2A6NK58 231 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 SCRG1O75711 98 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 IGHG1P01857 330 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 GYPAP02724 150 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 CST9LP1Q5W188 147 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 TMEM144Q7Z5S9 345 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 MRPL30Q8TCC3 161 aaKnown RBP13.35□□□□□ -0.27
CHFR-213ENST00000536843 TMEM9BQ9NQ34 198 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 FSCN3Q9NQT6 498 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 ESDP10768 282 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 TPPP2P59282 170 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 DTX1Q86Y01 620 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 WDR87Q6ZQQ6 2873 aa13.35□□□□□ -0.27
CHFR-213ENST00000536843 LY6G6EA0A0G2JKS1 128 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 SLC33A1O00400 549 aaPredicted RBP13.34□□□□□ -0.27
CHFR-213ENST00000536843 CCL25O15444 150 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 EFNA2O43921 213 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 NXPH3O95157 252 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 TMEM267Q0VDI3 215 aaPredicted RBP13.34□□□□□ -0.27
CHFR-213ENST00000536843 ZNF525Q8N782 197 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 LHX4Q969G2 390 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 RAB40CQ96S21 281 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 U3KQA8 63 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 H3BML4 177 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 ANGPTL7O43827 346 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 NDUFB8O95169 186 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 PSMB3P49720 205 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 LRRC75BQ2VPJ9 315 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 Q6ZPA2 131 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 WDR5BQ86VZ2 330 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 C20orf196Q8IYI0 205 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 NAT6Q93015 286 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 PARD6GQ9BYG4 376 aaPredicted RBP13.34□□□□□ -0.27
CHFR-213ENST00000536843 GSX1Q9H4S2 264 aaPredicted RBP13.34□□□□□ -0.27
CHFR-213ENST00000536843 KLRF1Q9NZS2 232 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 VPS13AQ96RL7 3174 aa13.34□□□□□ -0.27
CHFR-213ENST00000536843 IGHV5-10-1A0A0J9YXX1 117 aa13.33□□□□□ -0.27
CHFR-213ENST00000536843 SYNGR4O95473 234 aa13.33□□□□□ -0.27
CHFR-213ENST00000536843 PDGFBP01127 241 aaPredicted RBP13.33□□□□□ -0.27
CHFR-213ENST00000536843 OPN1LWP04000 364 aa13.33□□□□□ -0.27
CHFR-213ENST00000536843 CD99P14209 185 aa13.33□□□□□ -0.27
CHFR-213ENST00000536843 PTTG1IPP53801 180 aa13.33□□□□□ -0.27
CHFR-213ENST00000536843 RIPPLY2Q5TAB7 128 aa13.33□□□□□ -0.27
CHFR-213ENST00000536843 SPSB1Q96BD6 273 aa13.33□□□□□ -0.27
CHFR-213ENST00000536843 TECTBQ96PL2 329 aa13.33□□□□□ -0.27
CHFR-213ENST00000536843 ZNF160Q9HCG1 818 aa13.33□□□□□ -0.27
CHFR-213ENST00000536843 RARRES3Q9UL19 164 aa13.33□□□□□ -0.27
CHFR-213ENST00000536843 TRAV39A0A0B4J263 110 aa13.33□□□□□ -0.28
CHFR-213ENST00000536843 H3BP45 60 aa13.33□□□□□ -0.28
CHFR-213ENST00000536843 CD33P20138 364 aa13.33□□□□□ -0.28
CHFR-213ENST00000536843 SUMO3P55854 103 aaPredicted RBP13.33□□□□□ -0.28
CHFR-213ENST00000536843 PPP1CBP62140 327 aa13.33□□□□□ -0.28
CHFR-213ENST00000536843 RAC1P63000 192 aa13.33□□□□□ -0.28
CHFR-213ENST00000536843 FAM69BQ5VUD6 431 aa13.33□□□□□ -0.28
CHFR-213ENST00000536843 TMEM211Q6ICI0 200 aa13.33□□□□□ -0.28
CHFR-213ENST00000536843 ASCL4Q6XD76 172 aa13.33□□□□□ -0.28
CHFR-213ENST00000536843 CIB3Q96Q77 187 aaPredicted RBP13.33□□□□□ -0.28
CHFR-213ENST00000536843 SPOCK3Q9BQ16 436 aa13.33□□□□□ -0.28
CHFR-213ENST00000536843 SLC39A9Q9NUM3 307 aa13.33□□□□□ -0.28
CHFR-213ENST00000536843 ASCC3Q8N3C0 2202 aaKnown RBP13.33□□□□□ -0.28
CHFR-213ENST00000536843 OR6C6A6NF89 314 aa13.32□□□□□ -0.28
CHFR-213ENST00000536843 OR2J2O76002 312 aa13.32□□□□□ -0.28
CHFR-213ENST00000536843 FAM78BQ5VT40 261 aa13.32□□□□□ -0.28
CHFR-213ENST00000536843 CALHM1Q8IU99 346 aa13.32□□□□□ -0.28
CHFR-213ENST00000536843 OR10G3Q8NGC4 313 aa13.32□□□□□ -0.28
CHFR-213ENST00000536843 OR4B1Q8NGF8 309 aa13.32□□□□□ -0.28
CHFR-213ENST00000536843 OR5D13Q8NGL4 314 aa13.32□□□□□ -0.28
CHFR-213ENST00000536843 CCDC74BQ96LY2 380 aa13.32□□□□□ -0.28
CHFR-213ENST00000536843 SLC7A10Q9NS82 523 aa13.32□□□□□ -0.28
CHFR-213ENST00000536843 A0A0U1RQK1 487 aa13.32□□□□□ -0.28
CHFR-213ENST00000536843 ZNF320A2RRD8 509 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms