RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 CEACAM19Q7Z692 300 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 LRRTM1Q86UE6 522 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 FOXRED2Q8IWF2 684 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 GAPTQ8N292 157 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 Q8N6K4 173 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 OR52L2PQ8NGH6 319 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 MRPL30Q8TCC3 161 aaKnown RBP11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 NRG4Q8WWG1 115 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 TMEM203Q969S6 136 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 NEDD4LQ96PU5 975 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 OR2S2Q9NQN1 319 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 AURKAIP1Q9NWT8 199 aaPredicted RBP11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 GHRLQ9UBU3 117 aa11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 LSM2Q9Y333 95 aaKnown RBP11.29□□□□□ -0.6
RTN3P1-201ENST00000536295 NUDT19A8MXV4 375 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 MOSP00540 346 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 IGHG2P01859 326 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 GLAP06280 429 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 UBBP0CG47 229 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 HSMCR30P0CW71 290 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 VSIG8P0DPA2 414 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 CD1BP29016 333 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 GPR12P47775 334 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 RPL23AP62750 156 aaKnown RBP11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 SLC35B1P78383 322 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 TMEM30BQ3MIR4 351 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 HSD17B12Q53GQ0 312 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 LIPKQ5VXJ0 399 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 C18orf65Q6ZTR6 163 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 STPG2Q8N412 459 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 Q8N9W7 124 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 UFD1Q92890 307 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 SULT4A1Q9BR01 284 aa11.28□□□□□ -0.6
RTN3P1-201ENST00000536295 DNAH3Q8TD57 4116 aa11.27□□□□□ -0.6
RTN3P1-201ENST00000536295 TXNL1O43396 289 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 SRMP19623 302 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 HTR2CP28335 458 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 PPP1CCP36873 323 aaKnown RBP11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 MORN2Q502X0 79 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 C1orf100Q5SVJ3 147 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 C8orf86Q6ZUL3 223 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 OR2W3Q7Z3T1 314 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 C6orf201Q7Z4U5 140 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 PHYHIPQ92561 330 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 S1PR3Q99500 378 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 RASL11BQ9BPW5 248 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 NICN1Q9BSH3 213 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 FAAP24Q9BTP7 215 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 ABHD14AQ9BUJ0 271 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 TMEM59Q9BXS4 323 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 ABCG5Q9H222 651 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 MBNL3Q9NUK0 354 aaKnown RBP11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 LIN7CQ9NUP9 197 aaKnown RBP11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 TPRKBQ9Y3C4 175 aa11.27□□□□□ -0.61
RTN3P1-201ENST00000536295 AP4M1O00189 453 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 UCHL1P09936 223 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 CHATP28329 748 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 ZNF137PP52743 207 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 F2RL1P55085 397 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 RPS27AP62979 156 aaKnown RBP11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 UNC119Q13432 240 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 IRF3Q14653 427 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 ETV3LQ6ZN32 361 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 LINC00482Q8N8I6 264 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 KLHL30-AS1Q8NEE0 82 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 OR51D1Q8NGF3 324 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 KCNG3Q8TAE7 436 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 SETD6Q8TBK2 473 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 RCC1LQ96I51 464 aaKnown RBP11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 CCDC90BQ9GZT6 254 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 CHMP1AQ9HD42 196 aaPredicted RBP11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 PLSCR3Q9NRY6 295 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 JPT1Q9UK76 154 aa11.26□□□□□ -0.61
RTN3P1-201ENST00000536295 SLC22A1O15245 554 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 RGS10O43665 173 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 LANCL1O43813 399 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 RPS25P62851 125 aaKnown RBP11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 LSAMPQ13449 338 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 P2RY14Q15391 338 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 LCNL1Q6ZST4 164 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 MRPL41Q8IXM3 137 aaKnown RBP11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 COMMD1Q8N668 190 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 IL1F10Q8WWZ1 152 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 GALMQ96C23 342 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 DUX3Q96PT4 197 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 HSPB9Q9BQS6 159 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 PLGRKTQ9HBL7 147 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 ZFP57Q9NU63 452 aa11.25□□□□□ -0.61
RTN3P1-201ENST00000536295 SLC2A2P11168 524 aaPredicted RBP11.24□□□□□ -0.61
RTN3P1-201ENST00000536295 MYF6P23409 242 aa11.24□□□□□ -0.61
RTN3P1-201ENST00000536295 BLVRBP30043 206 aaPredicted RBP11.24□□□□□ -0.61
RTN3P1-201ENST00000536295 HOXD3P31249 432 aaPredicted RBP11.24□□□□□ -0.61
RTN3P1-201ENST00000536295 THBS3P49746 956 aa11.24□□□□□ -0.61
RTN3P1-201ENST00000536295 HTD2P86397 168 aa11.24□□□□□ -0.61
RTN3P1-201ENST00000536295 MMDQ15546 238 aa11.24□□□□□ -0.61
RTN3P1-201ENST00000536295 HMGN3Q15651 99 aa11.24□□□□□ -0.61
RTN3P1-201ENST00000536295 STEAP3Q658P3 488 aa11.24□□□□□ -0.61
RTN3P1-201ENST00000536295 TEX38Q6PEX7 206 aa11.24□□□□□ -0.61
RTN3P1-201ENST00000536295 ZNF554Q86TJ5 538 aa11.24□□□□□ -0.61
RTN3P1-201ENST00000536295 ODF3L1Q8IXM7 274 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms