RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 DEFB128Q7Z7B8 93 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF440Q8IYI8 595 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 OR2T35Q8NGX2 323 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 ARL11Q969Q4 196 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 PTH2Q96A98 100 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 GALNT14Q96FL9 552 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 MRAP2Q96G30 205 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 ARHGDIGQ99819 225 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF670Q9BS34 389 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 PBDC1Q9BVG4 233 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 SYT4Q9H2B2 425 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 ACP6Q9NPH0 428 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 SPANXA1Q9NS26 97 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 WRAP73Q9P2S5 460 aaPredicted RBP2.8□□□□□ -1.96
CSMD3-210ENST00000534172 RCL1Q9Y2P8 373 aaKnown RBP2.8□□□□□ -1.96
CSMD3-210ENST00000534172 FLVCR1Q9Y5Y0 555 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF638Q14966 1978 aaKnown RBP2.8□□□□□ -1.96
CSMD3-210ENST00000534172 ECM29Q5VYK3 1845 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 MYO18BQ8IUG5 2567 aa2.8□□□□□ -1.96
CSMD3-210ENST00000534172 A0A087X0T9 212 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 A0A1W2PRF3 423 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 A0A1W2PRM7 423 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 FAM231BA6NCW3 169 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 PRORSD1PA6NEY8 169 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 MCRIP1C9JLW8 97 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 K7EN84 100 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 SLC17A3O00476 420 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 PLPP1O14494 284 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 OR7C2O60412 319 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 STK16O75716 305 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 CNIH1O95406 144 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 RAB36O95755 333 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 GPR75O95800 540 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ADRA2AP08913 450 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 GZMBP10144 247 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 CD37P11049 281 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 OMGP23515 440 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 FGF9P31371 208 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 APLNRP35414 380 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 LIM2P55344 173 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 NDUFA6P56556 154 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 CLDN12P56749 244 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TAS2R41P59536 307 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ERVPABLB-1P60509 514 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 RND3P61587 244 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 RHOGP84095 191 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 CD47Q08722 323 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 HTR4Q13639 388 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TPBGQ13641 420 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 RHEBQ15382 184 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TSNQ15631 228 aaKnown RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 POU2AF1Q16633 256 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF658BQ4V348 819 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ACSM3Q53FZ2 586 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 PYDC2Q56P42 97 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TFDP3Q5H9I0 405 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 LCN8Q6JVE9 175 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 GLT6D1Q7Z4J2 308 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 SLC35E3Q7Z769 313 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ST6GALNAC3Q8NDV1 305 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 SLC7A13Q8TCU3 470 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ZPLD1Q8TCW7 415 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 RPEQ96AT9 228 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ZFP3Q96NJ6 502 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 NRIP2Q9BQI9 281 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 MIEN1Q9BRT3 115 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 DEFB129Q9H1M3 183 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 RBKSQ9H477 322 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 METTL17Q9H7H0 456 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 LYRM2Q9NU23 88 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 DOK5Q9P104 306 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 B4GALT7Q9UBV7 327 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 CFAP54Q96N23 3096 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 HELZ2Q9BYK8 2649 aaKnown RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TSC2P49815 1807 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 COL4A1P02462 1669 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 IGHV4-30-2A0A087WSY4 118 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 OR6C6A6NF89 314 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 PPP5D1E7EU14 171 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TNFSF11O14788 317 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 GJB5O95377 273 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 OR13C7P0DN81 318 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 PVRP15151 417 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 CXCL2P19875 107 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 GADD45AP24522 165 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 RPL29P47914 159 aaKnown RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TAF6P49848 677 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 DAP3P51398 398 aaKnown RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 AKR1C2P52895 323 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TPI1P60174 286 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TIMM10P62072 90 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 BTN3A2P78410 334 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF763Q0D2J5 394 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 SIX1Q15475 284 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 TMEM176BQ3YBM2 270 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 SPIN4Q56A73 249 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ZNF660Q6AZW8 331 aaPredicted RBP2.79□□□□□ -1.96
CSMD3-210ENST00000534172 ALKAL1Q6UXT8 129 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 OR6V1Q8N148 313 aa2.79□□□□□ -1.96
CSMD3-210ENST00000534172 OR2Z1Q8NG97 314 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms