RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 LRRC30A6NM36 301 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 CHST1O43916 411 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 PPP1CBP62140 327 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 FOXC1Q12948 553 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 SLC26A1Q9H2B4 701 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 ZDHHC11Q9H8X9 412 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 TAAR3PQ9P1P4 343 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 RCC2Q9P258 522 aaKnown RBP10.64□□□□□ -0.71
BDNF-218ENST00000533246 TCF20Q9UGU0 1960 aaKnown RBP10.64□□□□□ -0.71
BDNF-218ENST00000533246 RNPS1Q15287 305 aaKnown RBP10.64□□□□□ -0.71
BDNF-218ENST00000533246 SMIM21Q3B7S5 101 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 SNAI3Q3KNW1 292 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 CDPF1Q6NVV7 123 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 UNQ9370/PRO34162Q6UXP9 181 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 WSB1Q9Y6I7 421 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 NKX2-6A6NCS4 301 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 DVL1O14640 695 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 APOA2P02652 100 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 PGA4P0DJD7 388 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 HINT1P49773 126 aaPredicted RBP10.63□□□□□ -0.71
BDNF-218ENST00000533246 GFI1BQ5VTD9 330 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 LYG1Q8N1E2 194 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 SNHG12Q9BXW3 62 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 FAM117AQ9C073 453 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 OR2D2Q9H210 308 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 SEBOXQ9HB31 216 aaPredicted RBP10.63□□□□□ -0.71
BDNF-218ENST00000533246 MFNGO00587 321 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 SLC25A6P12236 298 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 DEFA4P12838 97 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 KLK2P20151 261 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 ZNF260Q3ZCT1 412 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 KCNIP4Q6PIL6 250 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 UNQ6494/PRO21346Q6UXR6 183 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 OR10X1Q8NGY0 326 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 DAZAP1Q96EP5 407 aaKnown RBP10.63□□□□□ -0.71
BDNF-218ENST00000533246 PIK3IP1Q96FE7 263 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 FAM103A1Q9BTL3 118 aaKnown RBP10.63□□□□□ -0.71
BDNF-218ENST00000533246 OR2J1Q9GZK6 312 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 EGLN1Q9GZT9 426 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 MYOZ1Q9NP98 299 aaPredicted RBP10.63□□□□□ -0.71
BDNF-218ENST00000533246 DNAH12Q6ZR08 3092 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 RALGAPA2Q2PPJ7 1873 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 RPS11P62280 158 aaKnown RBP eCLIP10.63□□□□□ -0.71
BDNF-218ENST00000533246 OR2M7Q8NG81 312 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 ZCCHC14Q8WYQ9 949 aaKnown RBP10.63□□□□□ -0.71
BDNF-218ENST00000533246 CCL17Q92583 94 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 OR5AC2Q9NZP5 309 aa10.63□□□□□ -0.71
BDNF-218ENST00000533246 HEATR1Q9H583 2144 aaKnown RBP10.63□□□□□ -0.71
BDNF-218ENST00000533246 A0A1W2PNV4 684 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 TMEM30CPA0ZSE6 113 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 PGA5P0DJD9 388 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 FAM27BQ5VT28 67 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 CDCP2Q5VXM1 449 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 C1QL2Q7Z5L3 287 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 OR1K1Q8NGR3 316 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 ZNF519Q8TB69 540 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 LRRC29Q8WV35 223 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 DNASE2BQ8WZ79 361 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 SSUH2Q9Y2M2 353 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 CARHSP1Q9Y2V2 147 aaKnown RBP10.62□□□□□ -0.71
BDNF-218ENST00000533246 POMT1Q9Y6A1 747 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 J3QR89 54 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 SELEP16581 610 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 OR10J1P30954 320 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 ZP1P60852 638 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 ZNF658BQ4V348 819 aaPredicted RBP10.62□□□□□ -0.71
BDNF-218ENST00000533246 SAMD13Q5VXD3 122 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 ERASQ7Z444 233 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 ZNF439Q8NDP4 499 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 FLVCR1-AS1Q8TAF5 88 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 MRGPRFQ96AM1 343 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 COMMD5Q9GZQ3 224 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 SLC25A22Q9H936 323 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 TRBV5-7A0A0A0MS05 114 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 CA11O75493 328 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 GCGP01275 180 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 CTSDP07339 412 aaPredicted RBP10.62□□□□□ -0.71
BDNF-218ENST00000533246 RFPL3SP0C7P2 107 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 TRGC1P0CF51 173 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 ZNF154Q13106 437 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 DPPA3Q6W0C5 159 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 ZNF485Q8NCK3 441 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 ZNF837Q96EG3 531 aaPredicted RBP10.62□□□□□ -0.71
BDNF-218ENST00000533246 ACY3Q96HD9 319 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 SF3B5Q9BWJ5 86 aaKnown RBP10.62□□□□□ -0.71
BDNF-218ENST00000533246 SLC35B3Q9H1N7 401 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 MTCH1Q9NZJ7 389 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 NKX6-3A6NJ46 265 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 IGLV3-21P80748 117 aaPredicted RBP10.62□□□□□ -0.71
BDNF-218ENST00000533246 DHODHQ02127 395 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 EIF3IQ13347 325 aaKnown RBP10.62□□□□□ -0.71
BDNF-218ENST00000533246 IZUMO4Q1ZYL8 232 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 C2orf68Q2NKX9 166 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 TMEM251Q8N6I4 163 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 ST6GALNAC3Q8NDV1 305 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 BEND2Q8NDZ0 799 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 OR13G1Q8NGZ3 307 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 RCC1LQ96I51 464 aaKnown RBP10.62□□□□□ -0.71
BDNF-218ENST00000533246 ZNF426Q9BUY5 554 aa10.62□□□□□ -0.71
BDNF-218ENST00000533246 CHODLQ9H9P2 273 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms