RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 C16orf92Q96LL3 132 aa7.63□□□□□ -1.19
CTNND1-232ENST00000532649 TMPRSS13Q9BYE2 586 aa7.63□□□□□ -1.19
CTNND1-232ENST00000532649 ZDBF2Q9HCK1 2354 aa7.63□□□□□ -1.19
CTNND1-232ENST00000532649 SFTA3P0C7M3 94 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 COL8A1P27658 744 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 GZMMP51124 257 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 FOXB2Q5VYV0 432 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 C19orf48Q6RUI8 117 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 LRP11Q86VZ4 500 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 OPN3Q9H1Y3 402 aaPredicted RBP7.62□□□□□ -1.19
CTNND1-232ENST00000532649 MS4A5Q9H3V2 200 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 MANBALQ9NQG1 85 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 ZMIZ1Q9ULJ6 1067 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 BOLA1Q9Y3E2 137 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 TMED3Q9Y3Q3 217 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 MAP1LC3B2A6NCE7 125 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 ALX3O95076 343 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 PRSS23O95084 383 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 IGHV3-13P01766 116 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 IGHV3-7P01780 117 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 CDX1P47902 265 aaPredicted RBP7.62□□□□□ -1.19
CTNND1-232ENST00000532649 FHL5Q5TD97 284 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 GBGT1Q8N5D6 347 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 OR8A1Q8NGG7 326 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 AQP10Q96PS8 301 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 MAP1LC3BQ9GZQ8 125 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 FRRS1LQ9P0K9 344 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 CLN8Q9UBY8 286 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 IGKV3D-11A0A0A0MRZ8 115 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 A0A1B0GUH1 482 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 CDIPTO14735 213 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 UPK3AO75631 287 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 IGKV3-11P04433 115 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 ZNF883P0CG24 379 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 CIRBPQ14011 172 aaKnown RBP7.62□□□□□ -1.19
CTNND1-232ENST00000532649 SSX8Q7RTT4 187 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 BAP18Q8IXM2 172 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 SNX22Q96L94 193 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 MRPL13Q9BYD1 178 aaKnown RBP7.62□□□□□ -1.19
CTNND1-232ENST00000532649 SRD5A3Q9H8P0 318 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 H7C2G1 150 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 SMAD7O15105 426 aaKnown RBP7.62□□□□□ -1.19
CTNND1-232ENST00000532649 CTAG2O75638 210 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 FAM106CPP0CH98 169 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 PRSS53Q2L4Q9 553 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 OR10AC1Q8NH08 325 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 NXF2Q9GZY0 626 aaKnown RBP7.62□□□□□ -1.19
CTNND1-232ENST00000532649 PARP11Q9NR21 331 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 SBF1O95248 1867 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 LMX1BO60663 402 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 IGLV3-19P01714 112 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 ERVFRD-1P60508 538 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 Q6ZNX1 250 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 FAM214BQ7L5A3 538 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 ZNF738Q8NE65 137 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 OR1L6Q8NGR2 347 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 ZNF502Q8TBZ5 544 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 PGPEP1Q9NXJ5 209 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 HIGD1AQ9Y241 93 aa7.62□□□□□ -1.19
CTNND1-232ENST00000532649 SMIM10L1P0DMW3 83 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 RPL29P47914 159 aaKnown RBP7.61□□□□□ -1.19
CTNND1-232ENST00000532649 PCOLCEQ15113 449 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 TMEM128Q5BJH2 165 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 DMKNQ6E0U4 476 aaPredicted RBP7.61□□□□□ -1.19
CTNND1-232ENST00000532649 CALHM1Q8IU99 346 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 OR10D4PQ8NGN7 298 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 ZCCHC14Q8WYQ9 949 aaKnown RBP7.61□□□□□ -1.19
CTNND1-232ENST00000532649 SMIM10Q96HG1 83 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 TP53RKQ96S44 253 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 SF3B6Q9Y3B4 125 aaKnown RBP7.61□□□□□ -1.19
CTNND1-232ENST00000532649 IGKV3OR2-268A0A0C4DH90 116 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 SNRPGP15A8MWD9 76 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 HOXD4P09016 255 aaPredicted RBP7.61□□□□□ -1.19
CTNND1-232ENST00000532649 SLC6A1P30531 599 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 SP6Q3SY56 376 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 MEIG1Q5JSS6 88 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 FAM78BQ5VT40 261 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 FAM222BQ8WU58 562 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 TMEM37Q8WXS4 190 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 AKIP1Q9NQ31 210 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 CACNG5Q9UF02 275 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 MMP24Q9Y5R2 645 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 CST4P01036 141 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 MAS1LP35410 378 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 JOSD1Q15040 202 aaPredicted RBP7.61□□□□□ -1.19
CTNND1-232ENST00000532649 BVESQ8NE79 360 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 OR4X1Q8NH49 305 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 MS4A10Q96PG2 267 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 PRR19A6NJB7 356 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 AHRRA9YTQ3 701 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 PYCARD-AS1I3L0S3 204 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 RGS13O14921 159 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 SMPD2O60906 423 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 HAND1O96004 215 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 COL5A1-AS1Q5SY13 56 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 SEZ6L2Q6UXD5 910 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 CADM3Q8N126 398 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 SPSB2Q99619 263 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 GPA33Q99795 319 aa7.61□□□□□ -1.19
CTNND1-232ENST00000532649 RASL12Q9NYN1 266 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms