RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 GNG10P50151 68 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 HABP2Q14520 560 aaPredicted RBP11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 GNMTQ14749 295 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 TMEM30BQ3MIR4 351 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 TIMM50Q3ZCQ8 353 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 MORN2Q502X0 79 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 LY6G6FQ5SQ64 297 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 SLC25A48Q6ZT89 311 aaKnown RBP11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 OR52L2PQ8NGH6 319 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 OR5H6Q8NGV6 325 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 CFHR4Q92496 578 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 ZNF747Q9BV97 191 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 FUNDC2Q9BWH2 189 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 Q9N2K0 584 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 VCX3AQ9NNX9 186 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 CLPSL1A2RUU4 121 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 POM121CA8CG34 1229 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 CRYBA1P05813 215 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 CEACAM3P40198 252 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 ALDH3B2P48448 385 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 ZNF137PP52743 207 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 KRTAP10-3P60369 221 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 STEAP3Q658P3 488 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 TMEM219Q86XT9 240 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 PRR18Q8N4B5 295 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 OR10V1Q8NGI7 309 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 OR4F5Q8NH21 305 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 LGALS14Q8TCE9 139 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 RAB3CQ96E17 227 aa11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 ELF5Q9UKW6 265 aaPredicted RBP11.17□□□□□ -0.62
TSPAN4-220ENST00000532375 IGKV1-6A0A0C4DH72 117 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 A0A1B0GUS0 222 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 YPEL1O60688 119 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 HIST1H1DP16402 221 aaKnown RBP11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 GNB3P16520 340 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 KIR2DS4P43632 304 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 SCAND1P57086 179 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 PROK1P58294 105 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 LSM3P62310 102 aaKnown RBP11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 ZNF816Q0VGE8 651 aaPredicted RBP11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 MADCAM1Q13477 382 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 DHRS7BQ6IAN0 325 aaPredicted RBP11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 Q6ZS46 218 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 ODF3L1Q8IXM7 274 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 SLC25A38Q96DW6 304 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 YPEL2Q96QA6 119 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 CMSS1Q9BQ75 279 aaKnown RBP11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 BEX1Q9HBH7 125 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 RAB9BQ9NP90 201 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 C12orf4Q9NQ89 552 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 OR2S2Q9NQN1 319 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 ABCB10Q9NRK6 738 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 KCNIP1Q9NZI2 227 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 GNG12Q9UBI6 72 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 JPT1Q9UK76 154 aa11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 AMMECR1Q9Y4X0 333 aaPredicted RBP11.16□□□□□ -0.62
TSPAN4-220ENST00000532375 METTL21EPA6NDL7 271 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 TIMM23O14925 209 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 AMY1AP04745 511 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 AMY2AP04746 511 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 SCTP09683 121 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 PPP1CCP36873 323 aaKnown RBP11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 NCS1P62166 190 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 HERPUD1Q15011 391 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 CTF1Q16619 201 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 MOB1BQ7L9L4 216 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 THNSL2Q86YJ6 484 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 Q8N2B8 174 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 C3orf56Q8N813 242 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 OR10X1Q8NGY0 326 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 TOMM40LQ969M1 308 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 RPEQ96AT9 228 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 GALMQ96C23 342 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 NAA50Q9GZZ1 169 aaKnown RBP11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 PARP12Q9H0J9 701 aaKnown RBP11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 ATG5Q9H1Y0 275 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 SIGLEC9Q9Y336 463 aa11.15□□□□□ -0.62
TSPAN4-220ENST00000532375 IGHV1-3A0A0C4DH29 117 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 TMEM127O75204 238 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 BRS3P32247 399 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 RAB7AP51149 207 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 BLCAPP62952 87 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 HLA-DRB3P79483 266 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 SRSF4Q08170 494 aaKnown RBP11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 EBI3Q14213 229 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 CDNFQ49AH0 187 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 IDNKQ5T6J7 187 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 CCDC144NLQ6NUI1 221 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 ANKRD13BQ86YJ7 626 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 OR8H3Q8N146 312 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 DRAM1Q8N682 238 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 RTN4IP1Q8WWV3 396 aaPredicted RBP11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 WFDC12Q8WWY7 111 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 AGMATQ9BSE5 352 aa11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 MRPS26Q9BYN8 205 aaKnown RBP11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 RANBP3Q9H6Z4 567 aaPredicted RBP11.14□□□□□ -0.63
TSPAN4-220ENST00000532375 ZNF702PQ9H963 129 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms