RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 TAF9BQ9HBM6 251 aa10.57□□□□□ -0.72
VPS28-211ENST00000530790 OR2S2Q9NQN1 319 aa10.57□□□□□ -0.72
VPS28-211ENST00000530790 MBNL3Q9NUK0 354 aaKnown RBP10.57□□□□□ -0.72
VPS28-211ENST00000530790 PSMB11A5LHX3 300 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 ARL6IP5O75915 188 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 PF4P02776 101 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 CRHBPP24387 322 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 CHATP28329 748 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 ZNF137PP52743 207 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 RPS25P62851 125 aaKnown RBP10.56□□□□□ -0.72
VPS28-211ENST00000530790 MLLT11Q13015 90 aaPredicted RBP10.56□□□□□ -0.72
VPS28-211ENST00000530790 TPBGQ13641 420 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 BEAN1Q3B7T3 259 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 TCTEX1D4Q5JR98 221 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 PRSS48Q7RTY5 328 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 SLC35E3Q7Z769 313 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 OR2T10Q8NGZ9 312 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 ST6GALNAC6Q969X2 333 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 EAF1Q96JC9 268 aaPredicted RBP10.56□□□□□ -0.72
VPS28-211ENST00000530790 SULT4A1Q9BR01 284 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 KCNK15Q9H427 330 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 PLGRKTQ9HBL7 147 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 ISYNA1Q9NPH2 558 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 JPT1Q9UK76 154 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 BLOC1S6Q9UL45 172 aa10.56□□□□□ -0.72
VPS28-211ENST00000530790 NCBP2LA6PVI3 153 aaKnown RBP10.55□□□□□ -0.72
VPS28-211ENST00000530790 SERPINE3A8MV23 424 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 BPNT1O95861 308 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 CPEP16870 476 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 CD33P20138 364 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 CD1BP29016 333 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 UNC119Q13432 240 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 EBI3Q14213 229 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 GNMTQ14749 295 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 CT45A1Q5HYN5 189 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 KPRPQ5T749 579 aaPredicted RBP10.55□□□□□ -0.72
VPS28-211ENST00000530790 C10orf99Q6UWK7 81 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 C6orf201Q7Z4U5 140 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 FOXRED2Q8IWF2 684 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 Q8N6K4 173 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 CT45A3Q8NHU0 189 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 CHPT1Q8WUD6 406 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 CYYR1Q96J86 154 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 CNBD2Q96M20 576 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 NICN1Q9BSH3 213 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 ABHD14AQ9BUJ0 271 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 TM2D1Q9BX74 207 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 CHMP1AQ9HD42 196 aaPredicted RBP10.55□□□□□ -0.72
VPS28-211ENST00000530790 ABRACLQ9P1F3 81 aa10.55□□□□□ -0.72
VPS28-211ENST00000530790 TMEM14DPA8MWL7 114 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 SLC17A2O00624 439 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 RGS11O94810 467 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 MOSP00540 346 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 ARSBP15848 533 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 PPP1CCP36873 323 aaKnown RBP10.54□□□□□ -0.72
VPS28-211ENST00000530790 MAP2K4P45985 399 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 ZNF134P52741 427 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 SLC35B1P78383 322 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 HTD2P86397 168 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 P2RY14Q15391 338 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 HMGN3Q15651 99 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 TBCEQ15813 527 aaPredicted RBP10.54□□□□□ -0.72
VPS28-211ENST00000530790 MORN2Q502X0 79 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 STEAP3Q658P3 488 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 TMEM91Q6ZNR0 172 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 MOB1BQ7L9L4 216 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 ZNF367Q7RTV3 350 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 OR52L2PQ8NGH6 319 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 GALMQ96C23 342 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 NOL4LQ96MY1 436 aaPredicted RBP10.54□□□□□ -0.72
VPS28-211ENST00000530790 MGLLQ99685 303 aa10.54□□□□□ -0.72
VPS28-211ENST00000530790 URM1Q9BTM9 101 aaKnown RBP10.54□□□□□ -0.72
VPS28-211ENST00000530790 LIN7CQ9NUP9 197 aaKnown RBP10.54□□□□□ -0.72
VPS28-211ENST00000530790 LANCL1O43813 399 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 IGHG2P01859 326 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 CALRP27797 417 aaKnown RBP10.53□□□□□ -0.72
VPS28-211ENST00000530790 BLVRBP30043 206 aaPredicted RBP10.53□□□□□ -0.72
VPS28-211ENST00000530790 QRFPP83859 136 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 LSAMPQ13449 338 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 RAB11BQ15907 218 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 OXLD1Q5BKU9 147 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 OR2W3Q7Z3T1 314 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 REC114Q7Z4M0 266 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 ZNF329Q86UD4 541 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 SVOPQ8N4V2 548 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 OR8H1Q8NGG4 311 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 IL1F10Q8WWZ1 152 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 FAAP24Q9BTP7 215 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 ABCG5Q9H222 651 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 PLEKHJ1Q9NW61 149 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 STEAP1Q9UHE8 339 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 LRRC42Q9Y546 428 aa10.53□□□□□ -0.72
VPS28-211ENST00000530790 A0A0A6YYD4 124 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 ZNF736B4DX44 427 aaPredicted RBP10.52□□□□□ -0.73
VPS28-211ENST00000530790 AP4M1O00189 453 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 YPEL1O60688 119 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 CD37P11049 281 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 RANBP1P43487 201 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 GPR12P47775 334 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 FABP5Q01469 135 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms