RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 IGLV1-36A0A0B4J1U3 117 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 TRAV8-4A0A0B4J246 113 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 FAM92AA1XBS5 289 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 RBMY1BA6NDE4 496 aaKnown RBP4.1□□□□□ -1.75
PCF11-202ENST00000528336 RBMY1EA6NEQ0 496 aaKnown RBP4.1□□□□□ -1.75
PCF11-202ENST00000528336 OR6C6A6NF89 314 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 C6orf47O95873 294 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 P01737 135 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 RBMY1DP0C7P1 496 aaKnown RBP4.1□□□□□ -1.75
PCF11-202ENST00000528336 RBMY1A1P0DJD3 496 aaKnown RBP4.1□□□□□ -1.75
PCF11-202ENST00000528336 CD99P14209 185 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 HMGA1P17096 107 aaKnown RBP4.1□□□□□ -1.75
PCF11-202ENST00000528336 TAC1P20366 129 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 ELK4P28324 431 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 GCKP35557 465 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 AP1S1P61966 158 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 ZNF763Q0D2J5 394 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 PRSS8Q16651 343 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 CDNFQ49AH0 187 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 SFXN4Q6P4A7 337 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 CLEC20AQ6ZU45 233 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 FAM183BPQ6ZVS7 135 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 DPPA2Q7Z7J5 298 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 CBR4Q8N4T8 237 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 Q8N7P7 452 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 OR6N1Q8NGY5 312 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 OR10A6Q8NH74 314 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 RDH12Q96NR8 316 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 OR51I1Q9H343 314 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 TXNIPQ9H3M7 391 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 TPK1Q9H3S4 243 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 PLSCR3Q9NRY6 295 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 TAS2R5Q9NYW4 299 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 OR1A1Q9P1Q5 309 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 TP53TG5Q9Y2B4 290 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 TMEM56-RWDD3S4R434 201 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 CLUHO75153 1309 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 LRRK1Q38SD2 2015 aa4.1□□□□□ -1.75
PCF11-202ENST00000528336 TDRD6O60522 2096 aaKnown RBP4.1□□□□□ -1.75
PCF11-202ENST00000528336 A0A0C4DFX4 3053 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 UNC80Q8N2C7 3258 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 A0A087WUJ7 227 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 IGHV3OR16-9A0A0B4J2B5 98 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 METTL15A6NJ78 407 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 M0QYV0 167 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 CHP2O43745 196 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 MED6O75586 246 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 GYPCP04921 128 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 CD1EP15812 388 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 IGLL1P15814 213 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 PAX6P26367 422 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 CCR2P41597 374 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 RAB5BP61020 215 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 NAA20P61599 178 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 PSPHP78330 225 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 C1orf195Q5TG92 126 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 LAMTOR1Q6IAA8 161 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 CNIH2Q6PI25 160 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 SMARCD3Q6STE5 483 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 MRPL55Q7Z7F7 128 aaKnown RBP4.09□□□□□ -1.75
PCF11-202ENST00000528336 DHFR2Q86XF0 187 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 KRTAP11-1Q8IUC1 163 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 TMEM86BQ8N661 226 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 CHST4Q8NCG5 386 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 SLC26A10Q8NG04 563 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 OR13G1Q8NGZ3 307 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 OR4X1Q8NH49 305 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 COQ8AQ8NI60 647 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 SLC37A2Q8TED4 501 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 RDH5Q92781 318 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 FGF13Q92913 245 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 UCN3Q969E3 161 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 TCEAL4Q96EI5 215 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 RNF185Q96GF1 192 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 OR11A1Q9GZK7 315 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 MIXL1Q9H2W2 232 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 FBXL15Q9H469 300 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 POMKQ9H5K3 350 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 RPF2Q9H7B2 306 aaKnown RBP4.09□□□□□ -1.75
PCF11-202ENST00000528336 PDFQ9HBH1 243 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 DNAJC27Q9NZQ0 273 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 OR52A1Q9UKL2 312 aa4.09□□□□□ -1.75
PCF11-202ENST00000528336 LSM5Q9Y4Y9 91 aaKnown RBP4.09□□□□□ -1.75
PCF11-202ENST00000528336 PLXNA3P51805 1871 aa4.09□□□□□ -1.76
PCF11-202ENST00000528336 IGLV8-61A0A075B6I0 122 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 LOC730098B7Z3J9 87 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 PPP5D1E7EU14 171 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 J3QT63 122 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 KPNA4O00629 521 aaPredicted RBP4.08□□□□□ -1.76
PCF11-202ENST00000528336 ARPC5O15511 151 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 NCOR1O75376 2440 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 PTHP01270 115 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 CRYGDP07320 174 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 IL9P15248 144 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 IGHV1-2P23083 117 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 CCR7P32248 378 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 TAS2R41P59536 307 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 ADIGQ0VDE8 80 aa4.08□□□□□ -1.76
PCF11-202ENST00000528336 LIN52Q52LA3 116 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms