RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 FABP5Q01469 135 aa26.28■■□□□ 1.8
SSSCA1-205ENST00000527920 HIST2H2BDQ6DRA6 164 aa26.28■■□□□ 1.8
SSSCA1-205ENST00000527920 FAM53AQ6NSI3 398 aaPredicted RBP26.28■■□□□ 1.8
SSSCA1-205ENST00000527920 OR5AU1Q8NGC0 362 aa26.28■■□□□ 1.8
SSSCA1-205ENST00000527920 RTN4IP1Q8WWV3 396 aaPredicted RBP26.28■■□□□ 1.8
SSSCA1-205ENST00000527920 CITED2Q99967 270 aaPredicted RBP26.28■■□□□ 1.8
SSSCA1-205ENST00000527920 PLGRKTQ9HBL7 147 aa26.28■■□□□ 1.8
SSSCA1-205ENST00000527920 ADARB2-AS1A8MUL3 147 aa26.27■■□□□ 1.8
SSSCA1-205ENST00000527920 IGKV1D-33P01593 117 aa26.27■■□□□ 1.8
SSSCA1-205ENST00000527920 IGKV1-33P01594 117 aa26.27■■□□□ 1.8
SSSCA1-205ENST00000527920 GABARAPL2P60520 117 aa26.27■■□□□ 1.8
SSSCA1-205ENST00000527920 HTD2P86397 168 aa26.27■■□□□ 1.8
SSSCA1-205ENST00000527920 CD83Q01151 205 aa26.27■■□□□ 1.8
SSSCA1-205ENST00000527920 PRR18Q8N4B5 295 aa26.27■■□□□ 1.8
SSSCA1-205ENST00000527920 C5orf56Q8N8D9 126 aa26.27■■□□□ 1.8
SSSCA1-205ENST00000527920 JPT1Q9UK76 154 aa26.27■■□□□ 1.8
SSSCA1-205ENST00000527920 KCNAB3O43448 404 aa26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 ARSBP15848 533 aa26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 CALRP27797 417 aaKnown RBP26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 CT45A1Q5HYN5 189 aa26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 C6orf201Q7Z4U5 140 aa26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 CENPVQ7Z7K6 275 aaPredicted RBP26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 MOB3BQ86TA1 216 aa26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 CT45A3Q8NHU0 189 aa26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 CYYR1Q96J86 154 aa26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 URM1Q9BTM9 101 aaKnown RBP26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 KCNK15Q9H427 330 aa26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 OR2S2Q9NQN1 319 aa26.26■■□□□ 1.79
SSSCA1-205ENST00000527920 SLC31A2O15432 143 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 REG1BP48304 166 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 PSMD7P51665 324 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 ZNF134P52741 427 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 NSUN5P1Q3KNT7 163 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 LY6G6FQ5SQ64 297 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 FAM89BQ8N5H3 189 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 OR4F17Q8NGA8 305 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 OR10V1Q8NGI7 309 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 OR4F4Q96R69 305 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 NICN1Q9BSH3 213 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 FAAP24Q9BTP7 215 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 LPAR5Q9H1C0 372 aa26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 AK6Q9Y3D8 172 aaKnown RBP26.25■■□□□ 1.79
SSSCA1-205ENST00000527920 NAPSAO96009 420 aa26.24■■□□□ 1.79
SSSCA1-205ENST00000527920 CD1BP29016 333 aa26.24■■□□□ 1.79
SSSCA1-205ENST00000527920 BLVRBP30043 206 aaPredicted RBP26.24■■□□□ 1.79
SSSCA1-205ENST00000527920 RAB11BQ15907 218 aa26.24■■□□□ 1.79
SSSCA1-205ENST00000527920 SSX1Q16384 188 aa26.24■■□□□ 1.79
SSSCA1-205ENST00000527920 MORN2Q502X0 79 aa26.24■■□□□ 1.79
SSSCA1-205ENST00000527920 SH2D7A6NKC9 451 aaPredicted RBP26.23■■□□□ 1.79
SSSCA1-205ENST00000527920 HNF4GQ14541 408 aa26.23■■□□□ 1.79
SSSCA1-205ENST00000527920 HMGN3Q15651 99 aa26.23■■□□□ 1.79
SSSCA1-205ENST00000527920 CD200R1LQ6Q8B3 271 aa26.23■■□□□ 1.79
SSSCA1-205ENST00000527920 LYG1Q8N1E2 194 aa26.23■■□□□ 1.79
SSSCA1-205ENST00000527920 Q8N6K4 173 aa26.23■■□□□ 1.79
SSSCA1-205ENST00000527920 OR2T10Q8NGZ9 312 aa26.23■■□□□ 1.79
SSSCA1-205ENST00000527920 EAF1Q96JC9 268 aaPredicted RBP26.23■■□□□ 1.79
SSSCA1-205ENST00000527920 RIMS4Q9H426 269 aaPredicted RBP26.23■■□□□ 1.79
SSSCA1-205ENST00000527920 Q9H521 79 aa26.23■■□□□ 1.79
SSSCA1-205ENST00000527920 NDUFB11Q9NX14 153 aa26.23■■□□□ 1.79
SSSCA1-205ENST00000527920 A0A0A6YYD4 124 aa26.22■■□□□ 1.79
SSSCA1-205ENST00000527920 P2RY14Q15391 338 aa26.22■■□□□ 1.79
SSSCA1-205ENST00000527920 C9orf152Q5JTZ5 239 aa26.22■■□□□ 1.79
SSSCA1-205ENST00000527920 ZNF880Q6PDB4 577 aa26.22■■□□□ 1.79
SSSCA1-205ENST00000527920 MOB1BQ7L9L4 216 aa26.22■■□□□ 1.79
SSSCA1-205ENST00000527920 TGIF2LXQ8IUE1 241 aa26.22■■□□□ 1.79
SSSCA1-205ENST00000527920 GALMQ96C23 342 aa26.22■■□□□ 1.79
SSSCA1-205ENST00000527920 PLEKHJ1Q9NW61 149 aa26.22■■□□□ 1.79
SSSCA1-205ENST00000527920 V9GY05 133 aa26.22■■□□□ 1.79
SSSCA1-205ENST00000527920 TRBV6-6A0A0A6YYG2 114 aa26.21■■□□□ 1.79
SSSCA1-205ENST00000527920 LANCL1O43813 399 aa26.21■■□□□ 1.79
SSSCA1-205ENST00000527920 YPEL1O60688 119 aa26.21■■□□□ 1.79
SSSCA1-205ENST00000527920 RGS11O94810 467 aa26.21■■□□□ 1.79
SSSCA1-205ENST00000527920 SVOPQ8N4V2 548 aa26.21■■□□□ 1.79
SSSCA1-205ENST00000527920 OR4X2Q8NGF9 303 aa26.21■■□□□ 1.79
SSSCA1-205ENST00000527920 YPEL2Q96QA6 119 aa26.21■■□□□ 1.79
SSSCA1-205ENST00000527920 ABRACLQ9P1F3 81 aa26.21■■□□□ 1.79
SSSCA1-205ENST00000527920 HSF4Q9ULV5 492 aa26.21■■□□□ 1.79
SSSCA1-205ENST00000527920 TRAV1-2A0A0B4J238 106 aa26.2■■□□□ 1.78
SSSCA1-205ENST00000527920 DENRO43583 198 aaKnown RBP26.2■■□□□ 1.78
SSSCA1-205ENST00000527920 GALP22466 123 aa26.2■■□□□ 1.78
SSSCA1-205ENST00000527920 TCTEX1D4Q5JR98 221 aa26.2■■□□□ 1.78
SSSCA1-205ENST00000527920 OR8H1Q8NGG4 311 aa26.2■■□□□ 1.78
SSSCA1-205ENST00000527920 OR52L2PQ8NGH6 319 aa26.2■■□□□ 1.78
SSSCA1-205ENST00000527920 R3HDM4Q96D70 268 aa26.2■■□□□ 1.78
SSSCA1-205ENST00000527920 ABHD14AQ9BUJ0 271 aa26.2■■□□□ 1.78
SSSCA1-205ENST00000527920 IGHV3-72A0A0B4J1Y9 119 aa26.19■■□□□ 1.78
SSSCA1-205ENST00000527920 FOXI3A8MTJ6 420 aaPredicted RBP26.19■■□□□ 1.78
SSSCA1-205ENST00000527920 GNMTQ14749 295 aa26.19■■□□□ 1.78
SSSCA1-205ENST00000527920 PDLIM3Q53GG5 364 aaPredicted RBP26.19■■□□□ 1.78
SSSCA1-205ENST00000527920 FAM3DQ96BQ1 224 aa26.19■■□□□ 1.78
SSSCA1-205ENST00000527920 YTHDF1Q9BYJ9 559 aaKnown RBP26.19■■□□□ 1.78
SSSCA1-205ENST00000527920 MOSP00540 346 aa26.18■■□□□ 1.78
SSSCA1-205ENST00000527920 PPP1CCP36873 323 aaKnown RBP26.18■■□□□ 1.78
SSSCA1-205ENST00000527920 OR51D1Q8NGF3 324 aa26.18■■□□□ 1.78
SSSCA1-205ENST00000527920 TSSC4Q9Y5U2 329 aaPredicted RBP26.18■■□□□ 1.78
SSSCA1-205ENST00000527920 PDCD5O14737 125 aa26.17■■□□□ 1.78
SSSCA1-205ENST00000527920 LDLRAD4O15165 306 aa26.17■■□□□ 1.78
SSSCA1-205ENST00000527920 SOCS1O15524 211 aa26.17■■□□□ 1.78
SSSCA1-205ENST00000527920 IGHG2P01859 326 aa26.17■■□□□ 1.78
SSSCA1-205ENST00000527920 UBE2UQ5VVX9 321 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms