RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 KCNIP1Q9NZI2 227 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 IL19Q9UHD0 177 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 IGHV1-46P01743 117 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 HEXAP06865 529 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 HOXB5P09067 269 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 GNRHRP30968 328 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 GATA4P43694 442 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 SULT1A2P50226 295 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 COL10A1Q03692 680 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 BOLLQ8N9W6 283 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 ESRP2Q9H6T0 727 aaKnown RBP13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 TAF9BQ9HBM6 251 aa13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 KLF2Q9Y5W3 355 aaPredicted RBP13.62□□□□□ -0.23
SNRNP35-204ENST00000527158 TRAV39A0A0B4J263 110 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 GPR31O00270 319 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 OR4A8P0C604 315 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 OR5AC1P0C628 307 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 PVALBP20472 110 aaPredicted RBP13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 PRDX2P32119 198 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 LY6DQ14210 128 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 LDLRAD3Q86YD5 345 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 PRR18Q8N4B5 295 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 OR11L1Q8NGX0 322 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 PARP11Q9NR21 331 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 MSGN1A6NI15 193 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 NPIPB11E5RHQ5 1161 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 K7EPK0 472 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 MPPED1O15442 326 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 S100A10P60903 97 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 HMGN3Q15651 99 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 ADIPOQQ15848 244 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 MST1LQ2TV78 715 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 SP6Q3SY56 376 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 H1FOOQ8IZA3 346 aaPredicted RBP13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 FAM71E2Q8N5Q1 922 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 COMMD1Q8N668 190 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 GCSAMQ8N6F7 178 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 GSKIPQ9P0R6 139 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 MLXQ9UH92 298 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 OR2W1Q9Y3N9 320 aa13.61□□□□□ -0.23
SNRNP35-204ENST00000527158 CADP27708 2225 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 FAM90A27PA6NNH2 459 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 ATXN7O15265 892 aaPredicted RBP13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 HSPA12AO43301 675 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 HKR1P10072 659 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 PSG2P11465 335 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 EGR1P18146 543 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 ADCYAP1P18509 176 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 AESQ08117 197 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 TMEM187Q14656 261 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 IAH1Q2TAA2 248 aaPredicted RBP13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 HFEQ30201 348 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 FBXL19-AS1Q494R0 122 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 SPRNQ5BIV9 151 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 ADAM5Q6NVV9 412 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 CMTM1Q8IZ96 169 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 ERGIC1Q969X5 290 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 DIRC2Q96SL1 478 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 SEBOXQ9HB31 216 aaPredicted RBP13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 PIEZO1Q92508 2521 aa13.6□□□□□ -0.23
SNRNP35-204ENST00000527158 PHF1O43189 567 aaPredicted RBP13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 DEDDO75618 318 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 LHBP01229 141 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 S100GP29377 79 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 RPL12P30050 165 aaKnown RBP13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 GABRA2P47869 451 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 OR3A1P47881 315 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 F2RL1P55085 397 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 RND3P61587 244 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 CD177Q8N6Q3 437 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 LILRB1Q8NHL6 650 aaPredicted RBP13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 RNASE6Q93091 150 aaKnown RBP13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 ERRFI1Q9UJM3 462 aaPredicted RBP13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 IGKV1D-13A0A0B4J2D9 117 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 C3orf85A0A1B0GTC6 90 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 TMEM8BA6NDV4 472 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 OOEPA6NGQ2 149 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 KCNAB3O43448 404 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 IGKV1-13P0DP09 117 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 GUCA2BQ16661 112 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 KRBOX4Q5JUW0 171 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 NCMAPQ5T1S8 102 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 LIAT1Q6ZQX7 453 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 ZNF818PQ6ZRF7 136 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 LGI3Q8N145 548 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 LRTM2Q8N967 370 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 PPP1R35Q8TAP8 253 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 GCM1Q9NP62 436 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 OR2S2Q9NQN1 319 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 RNF7Q9UBF6 113 aa13.59□□□□□ -0.23
SNRNP35-204ENST00000527158 HSD17B6O14756 317 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 TFF1P04155 84 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 ARHGDIBP52566 201 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 TMEM268Q5VZI3 342 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 TBC1D26Q86UD7 250 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 GALMQ96C23 342 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 CCL28Q9NRJ3 127 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 OR1A1Q9P1Q5 309 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 METRNQ9UJH8 293 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms