RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 MYF6P23409 242 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 ZNF93P35789 620 aaPredicted RBP12.49□□□□□ -0.41
PTPRU-210ENST00000527027 RAB9AP51151 201 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 LSAMPQ13449 338 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 DOC2BQ14184 412 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 MMDQ15546 238 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 TMEM30BQ3MIR4 351 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 STX19Q8N4C7 294 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 DHRSXQ8N5I4 330 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 GPR148Q8TDV2 347 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 S100A13Q99584 98 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 OR51J1Q9H342 316 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 ISYNA1Q9NPH2 558 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 TMEM138Q9NPI0 162 aa12.49□□□□□ -0.41
PTPRU-210ENST00000527027 GAR1Q9NY12 217 aaKnown RBP12.49□□□□□ -0.41
PTPRU-210ENST00000527027 EPPK1P58107 5090 aaKnown RBP12.49□□□□□ -0.41
PTPRU-210ENST00000527027 LANCL1O43813 399 aa12.48□□□□□ -0.41
PTPRU-210ENST00000527027 ZNF780AO75290 641 aaPredicted RBP12.48□□□□□ -0.41
PTPRU-210ENST00000527027 SAP30O75446 220 aa12.48□□□□□ -0.41
PTPRU-210ENST00000527027 SPNP16150 400 aa12.48□□□□□ -0.41
PTPRU-210ENST00000527027 SERPINA2P20848 420 aa12.48□□□□□ -0.41
PTPRU-210ENST00000527027 ZIK1Q3SY52 487 aaPredicted RBP12.48□□□□□ -0.41
PTPRU-210ENST00000527027 SYT6Q5T7P8 510 aaPredicted RBP12.48□□□□□ -0.41
PTPRU-210ENST00000527027 SETD9Q8NE22 299 aa12.48□□□□□ -0.41
PTPRU-210ENST00000527027 NRG4Q8WWG1 115 aa12.48□□□□□ -0.41
PTPRU-210ENST00000527027 RGP1Q92546 391 aaPredicted RBP12.48□□□□□ -0.41
PTPRU-210ENST00000527027 DLX4Q92988 240 aaPredicted RBP12.48□□□□□ -0.41
PTPRU-210ENST00000527027 CITED4Q96RK1 184 aa12.48□□□□□ -0.41
PTPRU-210ENST00000527027 Q9H521 79 aa12.48□□□□□ -0.41
PTPRU-210ENST00000527027 TRAPPC2LQ9UL33 140 aa12.48□□□□□ -0.41
PTPRU-210ENST00000527027 DNAH1Q9P2D7 4330 aa12.48□□□□□ -0.41
PTPRU-210ENST00000527027 TRAV41A0A0B4J266 112 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 LOC100130705A0A1B0GUX0 176 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 ATP6V0E1O15342 81 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 HLA-DRB1P01911 266 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 GTF2F2P13984 249 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 GP9P14770 177 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 GABRB1P18505 474 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 GTF2A1P52655 376 aaPredicted RBP12.47□□□□□ -0.41
PTPRU-210ENST00000527027 ACTBP60709 375 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 DDI2Q5TDH0 399 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 MINDY2Q8NBR6 621 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 OR10V1Q8NGI7 309 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 TMEM106AQ96A25 262 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 SPACA1Q9HBV2 294 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 AMBNQ9NP70 447 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 PARP11Q9NR21 331 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 GMPPBQ9Y5P6 360 aa12.47□□□□□ -0.41
PTPRU-210ENST00000527027 IGHV7-81A0A0B4J1V7 117 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 MCRIP1C9JLW8 97 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 HBZP02008 142 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 BDKRB2P30411 391 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 PPP3R1P63098 170 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 RAB40BQ12829 278 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 SLC22A6Q4U2R8 563 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 C6orf183Q5T699 404 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 IZUMO2Q6UXV1 221 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 PRR18Q8N4B5 295 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 OR1L1Q8NH94 360 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 RITA1Q96K30 269 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 Q96MT0 163 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 LYSTQ99698 3801 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 ZNF251Q9BRH9 671 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 ANKRD60Q9BZ19 345 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 ALX4Q9H161 411 aaPredicted RBP12.46□□□□□ -0.41
PTPRU-210ENST00000527027 GHITMQ9H3K2 345 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 RAB26Q9ULW5 256 aa12.46□□□□□ -0.41
PTPRU-210ENST00000527027 BIRC6Q9NR09 4857 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 A0A1W2PP11 408 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 TRIM64CA6NLI5 447 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 LINC01619G3V211 115 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 CNTFRP26992 372 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 CAPGP40121 348 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 GPR176Q14439 515 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 CCDC58Q4VC31 144 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 LIN54Q6MZP7 749 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 ACSM6Q6P461 480 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 RPL22L1Q6P5R6 122 aaKnown RBP12.45□□□□□ -0.42
PTPRU-210ENST00000527027 OR52I1Q8NGK6 324 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 OR6Q1Q8NGQ2 317 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 OR4K15Q8NH41 348 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 RHOXF1Q8NHV9 184 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 ZNF184Q99676 751 aaPredicted RBP12.45□□□□□ -0.42
PTPRU-210ENST00000527027 OR2S2Q9NQN1 319 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 ETAA1Q9NY74 926 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 RCC2Q9P258 522 aaKnown RBP12.45□□□□□ -0.42
PTPRU-210ENST00000527027 ERGIC3Q9Y282 383 aa12.45□□□□□ -0.42
PTPRU-210ENST00000527027 MAGEA13PA6NCF6 341 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 NBR2O15453 112 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 RCC1P18754 421 aaPredicted RBP12.44□□□□□ -0.42
PTPRU-210ENST00000527027 BLVRBP30043 206 aaPredicted RBP12.44□□□□□ -0.42
PTPRU-210ENST00000527027 SLURP1P55000 103 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 AQP4P55087 323 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 C5orf64Q2M2E5 130 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 MORN2Q502X0 79 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 ZFAND6Q6FIF0 208 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 XAF1Q6GPH4 301 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 TRAT1Q6PIZ9 186 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 GAPTQ8N292 157 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 CYGBQ8WWM9 190 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms