RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 FABP5Q01469 135 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 GPR176Q14439 515 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 PNLIPRP3Q17RR3 467 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 PAN3Q58A45 887 aaKnown RBP5.16□□□□□ -1.58
CD44-221ENST00000526000 CXorf66Q5JRM2 361 aaPredicted RBP5.16□□□□□ -1.58
CD44-221ENST00000526000 CASC10Q5T4H9 136 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 C9orf66Q5T8R8 295 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 CCDC144NLQ6NUI1 221 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 TEX38Q6PEX7 206 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 TMEM91Q6ZNR0 172 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 SATL1Q86VE3 508 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 THNSL2Q86YJ6 484 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 ANKRD13BQ86YJ7 626 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 FOXRED2Q8IWF2 684 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 PXT1Q8NFP0 134 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 OR5M8Q8NGP6 311 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 OR10X1Q8NGY0 326 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 MUC7Q8TAX7 377 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 PLPPR1Q8TBJ4 325 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 RAB2BQ8WUD1 216 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 CCDC107Q8WV48 283 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 SEBOXQ9HB31 216 aaPredicted RBP5.16□□□□□ -1.58
CD44-221ENST00000526000 CALYQ9NYX4 217 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 WSB1Q9Y6I7 421 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 RYR3Q15413 4870 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 SMIM31A0A1B0GVY4 71 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 OOSP1A8MZH6 123 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 ZNF701M0R085 212 aaPredicted RBP5.15□□□□□ -1.59
CD44-221ENST00000526000 KDM4BO94953 1096 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 GABARAPO95166 117 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 HTR3BO95264 441 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 BPNT1O95861 308 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 IGHG2P01859 326 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 CALRP27797 417 aaKnown RBP5.15□□□□□ -1.59
CD44-221ENST00000526000 ZNF93P35789 620 aaPredicted RBP5.15□□□□□ -1.59
CD44-221ENST00000526000 GPR12P47775 334 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 TMBIM6P55061 237 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 SCAND1P57086 179 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 MADCAM1Q13477 382 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 KIR2DS1Q14954 304 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 KISS1Q15726 138 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 SPIN3Q5JUX0 258 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 DDI2Q5TDH0 399 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 ZNF565Q8N9K5 539 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 Q8NFD4 153 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 OR11H1Q8NG94 326 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 OR6M1Q8NGM8 313 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 OR13C5Q8NGS8 318 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 TMEM203Q969S6 136 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 CREB3L1Q96BA8 519 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 MRPS24Q96EL2 167 aaKnown RBP5.15□□□□□ -1.59
CD44-221ENST00000526000 EAF1Q96JC9 268 aaPredicted RBP5.15□□□□□ -1.59
CD44-221ENST00000526000 RCHY1Q96PM5 261 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 GPER1Q99527 375 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 S100A13Q99584 98 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 HSPB9Q9BQS6 159 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 FAM192AQ9GZU8 254 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 KLK15Q9H2R5 256 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 PALMDQ9NP74 551 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 TXNL4BQ9NX01 149 aaKnown RBP5.15□□□□□ -1.59
CD44-221ENST00000526000 TAS2R4Q9NYW5 299 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 IL36GQ9NZH8 169 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 OR6C3Q9NZP0 311 aa5.15□□□□□ -1.59
CD44-221ENST00000526000 ZMAT5Q9UDW3 170 aaKnown RBP5.15□□□□□ -1.59
CD44-221ENST00000526000 ZNF256Q9Y2P7 627 aaPredicted RBP5.15□□□□□ -1.59
CD44-221ENST00000526000 AMMECR1Q9Y4X0 333 aaPredicted RBP5.15□□□□□ -1.59
CD44-221ENST00000526000 TRAV8-7A0A075B6U6 113 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 TRAV24A0A0B4J272 114 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 IGHV1-3A0A0C4DH29 117 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 NOTOA8MTQ0 251 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 AP4M1O00189 453 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 SLC17A2O00624 439 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 SLC22A1O15245 554 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 IL1AP01583 271 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 GAPDHP04406 335 aaKnown RBP5.14□□□□□ -1.59
CD44-221ENST00000526000 SLC2A2P11168 524 aaPredicted RBP5.14□□□□□ -1.59
CD44-221ENST00000526000 LYL1P12980 280 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 RAB3BP20337 219 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 GADD45AP24522 165 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 SSTR5P35346 364 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 RAB7AP51149 207 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 F2RL1P55085 397 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 DCTN2Q13561 401 aaKnown RBP5.14□□□□□ -1.59
CD44-221ENST00000526000 PIGYQ3MUY2 71 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 NHLRC3Q5JS37 347 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 C1orf100Q5SVJ3 147 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 ELP2Q6IA86 826 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 C22orf42Q6IC83 251 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 ASCL4Q6XD76 172 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 C5orf24Q7Z6I8 188 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 LINC00596Q86U02 117 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 LRRTM1Q86UE6 522 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 LYPD6Q86Y78 171 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 COMMD1Q8N668 190 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 Q8N9W7 124 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 OR51A2Q8NGJ7 313 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 OR1N2Q8NGR9 330 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 CASTOR1Q8WTX7 329 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 ARL11Q969Q4 196 aa5.14□□□□□ -1.59
CD44-221ENST00000526000 KCTD12Q96CX2 325 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms