RNA–Protein interactions for RNA: ENST00000525359.1

CLNS1A-203, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-203ENST00000525359 SHCBP1LQ9BZQ2 653 aa0.7□□□□□ -2.3
CLNS1A-203ENST00000525359 CHRAC1Q9NRG0 131 aa0.7□□□□□ -2.3
CLNS1A-203ENST00000525359 AHSPQ9NZD4 102 aa0.7□□□□□ -2.3
CLNS1A-203ENST00000525359 DNAJC27Q9NZQ0 273 aa0.7□□□□□ -2.3
CLNS1A-203ENST00000525359 ANXA10Q9UJ72 324 aa0.7□□□□□ -2.3
CLNS1A-203ENST00000525359 NUP98P52948 1817 aa0.7□□□□□ -2.3
CLNS1A-203ENST00000525359 ZNF609O15014 1411 aa0.7□□□□□ -2.3
CLNS1A-203ENST00000525359 SCN9AQ15858 1988 aa0.7□□□□□ -2.3
CLNS1A-203ENST00000525359 LAMB4A4D0S4 1761 aa0.7□□□□□ -2.3
CLNS1A-203ENST00000525359 BCORQ6W2J9 1755 aa0.7□□□□□ -2.3
CLNS1A-203ENST00000525359 DICER1Q9UPY3 1922 aaKnown RBP0.7□□□□□ -2.3
CLNS1A-203ENST00000525359 DDX60LQ5H9U9 1706 aaKnown RBP0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 PCNTO95613 3336 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 NRCAMQ92823 1304 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 COL1A1P02452 1464 aaPredicted RBP0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 IGHV1-45A0A0A0MS14 117 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 ODF3BA8MYP8 253 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 SUPT3HB4E1H0 165 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 SEC14L6B5MCN3 397 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 M0R1B8 84 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 ZNF593O00488 134 aaPredicted RBP0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 SNAI1O95863 264 aaPredicted RBP0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 GABRA1P14867 456 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 RPS12P25398 132 aaKnown RBP0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 ARR3P36575 388 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 RPS5P46782 204 aaKnown RBP0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 XKP51811 444 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 RAB25P57735 213 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 PSMC5P62195 406 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 LCN2P80188 198 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 SS18Q15532 418 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 ATP6V1FQ16864 119 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 Q499Y3 187 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 TMEM31Q5JXX7 168 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 GLYATQ6IB77 296 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 CCDC121Q6ZUS5 278 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 C10orf126Q8N4M7 172 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 PROKR2Q8NFJ6 384 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 OR2M3Q8NG83 312 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 OR4X1Q8NH49 305 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 OR51A7Q8NH64 312 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 GPX8Q8TED1 209 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 GLYATL2Q8WU03 294 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 OLFM3Q96PB7 478 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 C20orf144Q9BQM9 153 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 IL22Q9GZX6 179 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 BOLA2Q9H3K6 86 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 KCNIP2Q9NS61 270 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 SLC23A2Q9UGH3 650 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 RPUSD1Q9UJJ7 312 aaKnown RBP0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 CHTOPQ9Y3Y2 248 aaKnown RBP0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 MTCH2Q9Y6C9 303 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 URGCP-MRPS24S4R325 110 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 SIPA1L3O60292 1781 aaPredicted RBP0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 REV3LO60673 3130 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 ALPK3Q96L96 1907 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 MED23Q9ULK4 1368 aa0.69□□□□□ -2.3
CLNS1A-203ENST00000525359 PLXNB2O15031 1838 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 PHIPQ8WWQ0 1821 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 SYNRGQ9UMZ2 1314 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 UBR2Q8IWV8 1755 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 ARFGEF2Q9Y6D5 1785 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 LCTP09848 1927 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 AKAP11Q9UKA4 1901 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 TRAPPC3O43617 180 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 SLC25A20O43772 301 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 UTP20O75691 2785 aaKnown RBP0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 GALP22466 123 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 CSKP41240 450 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 GPR4P46093 362 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 RPL31P62899 125 aaKnown RBP0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 C2orf80Q0P641 193 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 RAB11BQ15907 218 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 CAVIN4Q5BKX8 364 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 NXNL2Q5VZ03 156 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 DUPD1Q68J44 220 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 EPGNQ6UW88 154 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 TPGS1Q6ZTW0 290 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 SCXQ7RTU7 201 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 MRPL21Q7Z2W9 205 aaKnown RBP0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 VN1R4Q7Z5H5 301 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 CA13Q8N1Q1 262 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 BBOF1Q8ND07 529 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 OR51Q1Q8NH59 317 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 GTF2H4Q92759 462 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 CERS2Q96G23 380 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 ZNF625Q96I27 306 aaPredicted RBP0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 DIABLOQ9NR28 239 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 IFNKQ9P0W0 207 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 PEF1Q9UBV8 284 aaKnown RBP0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 PLXNA1Q9UIW2 1896 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 GINS2Q9Y248 185 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 RRP15Q9Y3B9 282 aaKnown RBP0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 ZNF831Q5JPB2 1677 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 SPTBN5Q9NRC6 3674 aaKnown RBP0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 DLG5Q8TDM6 1919 aa0.68□□□□□ -2.3
CLNS1A-203ENST00000525359 CHD9Q3L8U1 2897 aa0.67□□□□□ -2.3
CLNS1A-203ENST00000525359 ZNF532Q9HCE3 1301 aa0.67□□□□□ -2.3
CLNS1A-203ENST00000525359 ECM29Q5VYK3 1845 aa0.67□□□□□ -2.3
CLNS1A-203ENST00000525359 SZT2Q5T011 3432 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms