RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 EBI3Q14213 229 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 HMGN3Q15651 99 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 LTC4SQ16873 150 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 OR56B1Q8NGI3 324 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 CFHR4Q92496 578 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 FAAP24Q9BTP7 215 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 SERTAD4Q9NUC0 356 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 TXNL4BQ9NX01 149 aaKnown RBP16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 GNG12Q9UBI6 72 aa16.72■□□□□ 0.27
TRAPPC9-215ENST00000524162 M0QZ24 198 aa16.71■□□□□ 0.27
TRAPPC9-215ENST00000524162 HSD17B6O14756 317 aa16.71■□□□□ 0.27
TRAPPC9-215ENST00000524162 YPEL1O60688 119 aa16.71■□□□□ 0.27
TRAPPC9-215ENST00000524162 CAPSLQ8WWF8 208 aa16.71■□□□□ 0.27
TRAPPC9-215ENST00000524162 GALMQ96C23 342 aa16.71■□□□□ 0.27
TRAPPC9-215ENST00000524162 YPEL2Q96QA6 119 aa16.71■□□□□ 0.27
TRAPPC9-215ENST00000524162 SLC25A33Q9BSK2 321 aa16.71■□□□□ 0.27
TRAPPC9-215ENST00000524162 KCNK15Q9H427 330 aa16.71■□□□□ 0.27
TRAPPC9-215ENST00000524162 SOCS1O15524 211 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 RGS11O94810 467 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 IGHV3-7P01780 117 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 LPLP06858 475 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 TMEM50BP56557 158 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 HERPUD1Q15011 391 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 MORN2Q502X0 79 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 C22orf42Q6IC83 251 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 OR1L1Q8NH94 360 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 WIPF2Q8TF74 440 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 WNT10AQ9GZT5 417 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 OR2S2Q9NQN1 319 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 SSR3Q9UNL2 185 aa16.7■□□□□ 0.26
TRAPPC9-215ENST00000524162 TMEM272A0A1B0GTI8 110 aa16.69■□□□□ 0.26
TRAPPC9-215ENST00000524162 CLDN12P56749 244 aa16.69■□□□□ 0.26
TRAPPC9-215ENST00000524162 SRSF4Q08170 494 aaKnown RBP16.69■□□□□ 0.26
TRAPPC9-215ENST00000524162 CT45A1Q5HYN5 189 aa16.69■□□□□ 0.26
TRAPPC9-215ENST00000524162 Q6ZTK2 550 aa16.69■□□□□ 0.26
TRAPPC9-215ENST00000524162 IZUMO1Q8IYV9 350 aa16.69■□□□□ 0.26
TRAPPC9-215ENST00000524162 DRAM1Q8N682 238 aa16.69■□□□□ 0.26
TRAPPC9-215ENST00000524162 CT45A3Q8NHU0 189 aa16.69■□□□□ 0.26
TRAPPC9-215ENST00000524162 C12orf4Q9NQ89 552 aa16.69■□□□□ 0.26
TRAPPC9-215ENST00000524162 ABRACLQ9P1F3 81 aa16.69■□□□□ 0.26
TRAPPC9-215ENST00000524162 CMYA5Q8N3K9 4069 aa16.69■□□□□ 0.26
TRAPPC9-215ENST00000524162 IGHV1-3A0A0C4DH29 117 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 NOTOA8MTQ0 251 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 ITGB1BP1O14713 200 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 FGF16O43320 207 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 TMEM127O75204 238 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 ZNF134P52741 427 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 OR10A3P58181 314 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 BLCAPP62952 87 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 HES5Q5TA89 166 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 OR56B4Q8NH76 319 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 RTN4IP1Q8WWV3 396 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 GHITMQ9H3K2 345 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 SIGLEC9Q9Y336 463 aa16.68■□□□□ 0.26
TRAPPC9-215ENST00000524162 IGHV3-43A0A0B4J1X8 118 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 LANCL1O43813 399 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 TNFAIP8O95379 198 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 AMY1AP04745 511 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 AMY2AP04746 511 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 IGHV3-43DP0DP04 118 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 CD24P25063 80 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 CD1BP29016 333 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 VEGFCP49767 419 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 DIAPH2-AS1Q14236 149 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 ARL6IP1Q15041 203 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 TREML4Q6UXN2 200 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 NR2C2APQ86WQ0 139 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 PRR18Q8N4B5 295 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 KLHDC1Q8N7A1 406 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 UBALD1Q8TB05 177 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 KCTD7Q96MP8 289 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 PECRQ9BY49 303 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 AK3Q9UIJ7 227 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 MOB4Q9Y3A3 225 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 NOTCH1P46531 2555 aa16.67■□□□□ 0.26
TRAPPC9-215ENST00000524162 A0A1W2PPE3 182 aa16.66■□□□□ 0.26
TRAPPC9-215ENST00000524162 METTL21EPA6NDL7 271 aa16.66■□□□□ 0.26
TRAPPC9-215ENST00000524162 SNRNP70P08621 437 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-215ENST00000524162 SCAND1P57086 179 aa16.66■□□□□ 0.26
TRAPPC9-215ENST00000524162 ARHGAP5-AS1Q96IT6 56 aa16.66■□□□□ 0.26
TRAPPC9-215ENST00000524162 A0A087WXM4 84 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 RAB27BO00194 218 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 DIRAS3O95661 229 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 GADD45AP24522 165 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 C2orf68Q2NKX9 166 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 TIMM50Q3ZCQ8 353 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 PLAC9Q5JTB6 97 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 FAM71F2Q6NXP2 309 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 Q6ZPA2 131 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 TGIF2LXQ8IUE1 241 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 OR8H1Q8NGG4 311 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 RAB3CQ96E17 227 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 CENPOQ9BU64 300 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 ABHD14AQ9BUJ0 271 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 MMP27Q9H306 513 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 CHMP1AQ9HD42 196 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 Q9N2K0 584 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 VCX3AQ9NNX9 186 aa16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRAPPC9-215ENST00000524162 SERPINE3A8MV23 424 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms