RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 RAB2AP61019 212 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 TMEM164Q5U3C3 297 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 HEPN1Q6WQI6 88 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF429Q86V71 674 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 NANPQ8TBE9 248 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 MUCL1Q96DR8 90 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 ARRDC1-AS1Q9H2J1 176 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 TREM2Q9NZC2 230 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 CACNG5Q9UF02 275 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 KLF13Q9Y2Y9 288 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-228ENST00000524023 WSB1Q9Y6I7 421 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 A0A1W2PR80 420 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 SIRPB1O00241 398 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 SYNGR2O43760 224 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 IGKV1-5P01602 117 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 S100A9P06702 114 aaKnown RBP9.39□□□□□ -0.91
HDAC9-228ENST00000524023 OR8U8P0C7N1 319 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 NQO2P16083 231 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 TAGLN2P37802 199 aaKnown RBP9.39□□□□□ -0.91
HDAC9-228ENST00000524023 UBE2KP61086 200 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 SLC10A1Q14973 349 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 KHDC3LQ587J8 217 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 FBXW9Q5XUX1 488 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 SLC25A24Q6NUK1 477 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF497Q6ZNH5 498 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 MOB1BQ7L9L4 216 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 SLC16A13Q7RTY0 426 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 P4HA3Q7Z4N8 544 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 WDR86Q86TI4 376 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 PRR18Q8N4B5 295 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 NANOS1Q8WY41 292 aaKnown RBP9.39□□□□□ -0.91
HDAC9-228ENST00000524023 RTL8AQ9BWD3 113 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 PPP1R3CQ9UQK1 317 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 R4GN57 208 aa9.39□□□□□ -0.91
HDAC9-228ENST00000524023 PRRC2CQ9Y520 2896 aaKnown RBP9.38□□□□□ -0.91
HDAC9-228ENST00000524023 A0A087WWC5 75 aa9.38□□□□□ -0.91
HDAC9-228ENST00000524023 TRAV1-1A0A0B4J248 108 aa9.38□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF727A8MUV8 499 aa9.38□□□□□ -0.91
HDAC9-228ENST00000524023 KLRC4-KLRK1H3BQV0 150 aa9.38□□□□□ -0.91
HDAC9-228ENST00000524023 AP4M1O00189 453 aa9.38□□□□□ -0.91
HDAC9-228ENST00000524023 OR2H2O95918 312 aa9.38□□□□□ -0.91
HDAC9-228ENST00000524023 IFNA17P01571 189 aa9.38□□□□□ -0.91
HDAC9-228ENST00000524023 DLK1P80370 383 aa9.38□□□□□ -0.91
HDAC9-228ENST00000524023 SCCPDHQ8NBX0 429 aa9.38□□□□□ -0.91
HDAC9-228ENST00000524023 MDS2Q8NDY4 140 aa9.38□□□□□ -0.91
HDAC9-228ENST00000524023 IL17BQ9UHF5 180 aa9.38□□□□□ -0.91
HDAC9-228ENST00000524023 COLQQ9Y215 455 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-228ENST00000524023 LOC102723971A0A1B0GUV8 181 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF806P0C7X5 589 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 IAPPP10997 89 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 ERVK11-1P61568 191 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF585BQ52M93 769 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 VASH2Q86V25 355 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 MYPOPQ86VE0 399 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-228ENST00000524023 Q8IYB0 196 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 TVP23CQ96ET8 276 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 WDYHV1Q96HA8 205 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 NIPSNAP3BQ9BS92 247 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 DEFB127Q9H1M4 99 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 PSENENQ9NZ42 101 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 TRAPPC2LQ9UL33 140 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 RBM7Q9Y580 266 aaKnown RBP9.37□□□□□ -0.91
HDAC9-228ENST00000524023 KIAA2026Q5HYC2 2103 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 GPR179Q6PRD1 2367 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 LNP1A1A4G5 178 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 ARL16Q0P5N6 197 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 TBC1D28Q2M2D7 210 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF525Q8N782 197 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 OR10G4Q8NGN3 311 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 UBALD1Q8TB05 177 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 SCGB1C1Q8TD33 95 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 TCEAL7Q9BRU2 100 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 RSG1Q9BU20 258 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 RPRMQ9NS64 109 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 LIN7CQ9NUP9 197 aaKnown RBP9.37□□□□□ -0.91
HDAC9-228ENST00000524023 KCNS2Q9ULS6 477 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 MMP24Q9Y5R2 645 aa9.37□□□□□ -0.91
HDAC9-228ENST00000524023 J3QW42 95 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 WDR1O75083 606 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 CELA3BP08861 270 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 METTL15P1P0C7V9 234 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 PGA5P0DJD9 388 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF16P17020 682 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-228ENST00000524023 CD200P41217 278 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 RPS10P46783 165 aaKnown RBP9.36□□□□□ -0.91
HDAC9-228ENST00000524023 SLC35E3Q7Z769 313 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 HAPLN4Q86UW8 402 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 ZNF251Q9BRH9 671 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 OR2J1Q9GZK6 312 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 MBNL3Q9NUK0 354 aaKnown RBP9.36□□□□□ -0.91
HDAC9-228ENST00000524023 POLDIP2Q9Y2S7 368 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 WIPI2Q9Y4P8 454 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 NCOR1O75376 2440 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 CDIPTO14735 213 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 ATXN7O15265 892 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-228ENST00000524023 SMPD2O60906 423 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 CEACAM6P40199 344 aa9.36□□□□□ -0.91
HDAC9-228ENST00000524023 EIF2S3P41091 472 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms