RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 PSMB6P28072 239 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 TSPOP30536 169 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 KDELR2P33947 212 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 MAGEA3P43357 314 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 GCLMP48507 274 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 TTPAP49638 278 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 EMP2P54851 167 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 MAP3K7CLP57077 242 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 RAB38P57729 211 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 BAXQ07812 192 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 ANGPT1Q15389 498 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 TMEM249Q2WGJ8 235 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 BSXQ3C1V8 233 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 OR10J3Q5JRS4 329 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 RBM48Q5RL73 367 aaKnown RBP0.58□□□□□ -2.32
CLK4-213ENST00000523013 HBMQ6B0K9 141 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 SSX7Q7RTT5 188 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 MRPL52Q86TS9 123 aaKnown RBP0.58□□□□□ -2.32
CLK4-213ENST00000523013 SPATA24Q86W54 205 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 OR7G1Q8NGA0 311 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 OR4K17Q8NGC6 315 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 RNASEH2CQ8TDP1 164 aaKnown RBP0.58□□□□□ -2.32
CLK4-213ENST00000523013 GTF2H4Q92759 462 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 CCDC124Q96CT7 223 aaKnown RBP0.58□□□□□ -2.32
CLK4-213ENST00000523013 FAM210AQ96ND0 272 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 TRNT1Q96Q11 434 aaKnown RBP0.58□□□□□ -2.32
CLK4-213ENST00000523013 HBEGFQ99075 208 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 COPS4Q9BT78 406 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 BEX2Q9BXY8 128 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 CHMP4BQ9H444 224 aaKnown RBP0.58□□□□□ -2.32
CLK4-213ENST00000523013 IFT46Q9NQC8 304 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 ZNHIT6Q9NWK9 470 aaKnown RBP0.58□□□□□ -2.32
CLK4-213ENST00000523013 DNAJC27Q9NZQ0 273 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 NOSIPQ9Y314 301 aaKnown RBP0.58□□□□□ -2.32
CLK4-213ENST00000523013 USH1CQ9Y6N9 552 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 DSCAML1Q8TD84 2053 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 USP42Q9H9J4 1324 aaKnown RBP0.58□□□□□ -2.32
CLK4-213ENST00000523013 MYO15BQ96JP2 1530 aa0.58□□□□□ -2.32
CLK4-213ENST00000523013 MALRD1Q5VYJ5 2156 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 FN1P02751 2386 aaKnown RBP0.57□□□□□ -2.32
CLK4-213ENST00000523013 TRPC5OSA6NMA1 111 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 A8MWP6 167 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 SMLR1H3BR10 107 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 GOLGA8RI6L899 631 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 J3QLI3 93 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 ITGB1BP1O14713 200 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 UBDO15205 165 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 TOX3O15405 576 aaPredicted RBP0.57□□□□□ -2.32
CLK4-213ENST00000523013 FABP7O15540 132 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 FGF16O43320 207 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 CYTH3O43739 400 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 MPZL2O60487 215 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 PDCD6O75340 191 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 ADAP1O75689 374 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 YEATS4O95619 227 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 LIMS3P0CW19 117 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 LIMS4P0CW20 117 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 ZNF3P17036 446 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 CRATP43155 626 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 RPL14P50914 215 aaKnown RBP0.57□□□□□ -2.32
CLK4-213ENST00000523013 STC1P52823 247 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 UBE2G2P60604 165 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 DSTNP60981 165 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 SKP1P63208 163 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 PRB3Q04118 309 aaPredicted RBP0.57□□□□□ -2.32
CLK4-213ENST00000523013 STX4Q12846 297 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 RAB31Q13636 194 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 HTR4Q13639 388 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 FLOT2Q14254 428 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 SYCP1Q15431 976 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 TRAM1Q15629 374 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 TRIP13Q15645 432 aaPredicted RBP0.57□□□□□ -2.32
CLK4-213ENST00000523013 EXOC3L4Q17RC7 722 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 HES3Q5TGS1 186 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 FAM19A3Q7Z5A8 133 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 BOD1L2Q8IYS8 172 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 ZFAND2AQ8N6M9 145 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 ACBD4Q8NC06 268 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 LFNGQ8NES3 379 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 OR8G5Q8NG78 346 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 OR5L1Q8NGL2 311 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 FAM45AQ8TCE6 357 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 DNAJB3Q8WWF6 145 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 TMBIM1Q969X1 311 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 ZNF396Q96N95 335 aaPredicted RBP0.57□□□□□ -2.32
CLK4-213ENST00000523013 CATSPER2Q96P56 530 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 VAT1Q99536 393 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 PRSS27Q9BQR3 290 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 SUCNR1Q9BXA5 334 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 BBS2Q9BXC9 721 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 METTL17Q9H7H0 456 aaPredicted RBP0.57□□□□□ -2.32
CLK4-213ENST00000523013 WDR54Q9H977 334 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 TMBIM4Q9HC24 238 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 C1orf109Q9NX04 203 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 FBXL3Q9UKT7 428 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 C15orf41Q9Y2V0 281 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 TBL2Q9Y4P3 447 aaKnown RBP0.57□□□□□ -2.32
CLK4-213ENST00000523013 PUS1Q9Y606 427 aaKnown RBP eCLIP0.57□□□□□ -2.32
CLK4-213ENST00000523013 DCAF1Q9Y4B6 1507 aa0.57□□□□□ -2.32
CLK4-213ENST00000523013 ABCB11O95342 1321 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms