RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 GNG12Q9UBI6 72 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 KCNK7Q9Y2U2 307 aa14.28□□□□□ -0.12
CLK4-211ENST00000522556 AMMECR1Q9Y4X0 333 aaPredicted RBP14.28□□□□□ -0.12
CLK4-211ENST00000522556 LOC100506127A0A0U1RQW1 187 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 HSD17B6O14756 317 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 AMY1AP04745 511 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 AMY2AP04746 511 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 SNRNP70P08621 437 aaKnown RBP14.27□□□□□ -0.13
CLK4-211ENST00000522556 CD36P16671 472 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 ZNF880Q6PDB4 577 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 SLC16A12Q6ZSM3 486 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 C11orf44Q8N8P7 122 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 SETD6Q8TBK2 473 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 CAPSLQ8WWF8 208 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 ST6GALNAC6Q969X2 333 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 SLC25A33Q9BSK2 321 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 RANBP3Q9H6Z4 567 aaPredicted RBP14.27□□□□□ -0.13
CLK4-211ENST00000522556 RAB18Q9NP72 206 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 OR2S2Q9NQN1 319 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 SSR3Q9UNL2 185 aa14.27□□□□□ -0.13
CLK4-211ENST00000522556 SDC2P34741 201 aa14.26□□□□□ -0.13
CLK4-211ENST00000522556 MXD1Q05195 221 aa14.26□□□□□ -0.13
CLK4-211ENST00000522556 SLC25A48Q6ZT89 311 aaKnown RBP14.26□□□□□ -0.13
CLK4-211ENST00000522556 Q8N2B8 174 aa14.26□□□□□ -0.13
CLK4-211ENST00000522556 LINC00311Q8N616 119 aa14.26□□□□□ -0.13
CLK4-211ENST00000522556 KLHDC1Q8N7A1 406 aa14.26□□□□□ -0.13
CLK4-211ENST00000522556 TSPAN14Q8NG11 270 aa14.26□□□□□ -0.13
CLK4-211ENST00000522556 CREB3L1Q96BA8 519 aa14.26□□□□□ -0.13
CLK4-211ENST00000522556 CHMP1AQ9HD42 196 aaPredicted RBP14.26□□□□□ -0.13
CLK4-211ENST00000522556 PITPNC1Q9UKF7 332 aa14.26□□□□□ -0.13
CLK4-211ENST00000522556 IGHV1-3A0A0C4DH29 117 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 FAM90A9PA6NNJ1 464 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 OOSP1A8MZH6 123 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 ZNF736B4DX44 427 aaPredicted RBP14.25□□□□□ -0.13
CLK4-211ENST00000522556 RAB27BO00194 218 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 SNRPBP14678 240 aaKnown RBP14.25□□□□□ -0.13
CLK4-211ENST00000522556 BRS3P32247 399 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 PSMD7P51665 324 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 ZNF816Q0VGE8 651 aaPredicted RBP14.25□□□□□ -0.13
CLK4-211ENST00000522556 MORN2Q502X0 79 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 TRAT1Q6PIZ9 186 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 OR2T6Q8NHC8 308 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 OCSTAMPQ9BR26 566 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 KCNIP1Q9NZI2 227 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 ELF5Q9UKW6 265 aaPredicted RBP14.25□□□□□ -0.13
CLK4-211ENST00000522556 RAB22AQ9UL26 194 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 HSF4Q9ULV5 492 aa14.25□□□□□ -0.13
CLK4-211ENST00000522556 NOTOA8MTQ0 251 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 TNFAIP8O95379 198 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 VSIG10L2P0DP72 767 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 GNB3P16520 340 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 MNDAP41218 407 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 HNF4GQ14541 408 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 CCDC144NLQ6NUI1 221 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 Q6ZTK2 550 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 ODF3L1Q8IXM7 274 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 C8orf31Q8N9H6 132 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 OR56B1Q8NGI3 324 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 LGALS14Q8TCE9 139 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 IL1F10Q8WWZ1 152 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 RBM14Q96PK6 669 aaKnown RBP14.24□□□□□ -0.13
CLK4-211ENST00000522556 ZNF696Q9H7X3 374 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 OR1A1Q9P1Q5 309 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 DAPK2Q9UIK4 370 aa14.24□□□□□ -0.13
CLK4-211ENST00000522556 A0A075B6Q4 140 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 H3BUI4 141 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 MFNGO00587 321 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 OR2F2O95006 317 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 IGKV1D-33P01593 117 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 IGKV1-33P01594 117 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 SCTP09683 121 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 SMIM18P0DKX4 95 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 RAB7AP51149 207 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 HLA-DRB3P79483 266 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 ABCA11PQ4W5N1 156 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 SFXN4Q6P4A7 337 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 MOB3BQ86TA1 216 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 ZNF554Q86TJ5 538 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 OR8H3Q8N146 312 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 SGMS2Q8NHU3 365 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 RTN4IP1Q8WWV3 396 aaPredicted RBP14.23□□□□□ -0.13
CLK4-211ENST00000522556 MAFIPQ8WZ33 124 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 YIPF6Q96EC8 236 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 KCTD7Q96MP8 289 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 Q9N2K0 584 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 C12orf4Q9NQ89 552 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 JPT1Q9UK76 154 aa14.23□□□□□ -0.13
CLK4-211ENST00000522556 TRRAPQ9Y4A5 3859 aa14.22□□□□□ -0.13
CLK4-211ENST00000522556 TET2Q6N021 2002 aaPredicted RBP14.22□□□□□ -0.13
CLK4-211ENST00000522556 A0A087WXM4 84 aa14.22□□□□□ -0.13
CLK4-211ENST00000522556 TRBV6-6A0A0A6YYG2 114 aa14.22□□□□□ -0.13
CLK4-211ENST00000522556 IGKV1-6A0A0C4DH72 117 aa14.22□□□□□ -0.13
CLK4-211ENST00000522556 TRIM64CA6NLI5 447 aa14.22□□□□□ -0.13
CLK4-211ENST00000522556 TSPAN15O95858 294 aa14.22□□□□□ -0.13
CLK4-211ENST00000522556 RAB6AP20340 208 aa14.22□□□□□ -0.13
CLK4-211ENST00000522556 ARHGDIBP52566 201 aa14.22□□□□□ -0.13
CLK4-211ENST00000522556 ZNF137PP52743 207 aa14.22□□□□□ -0.13
CLK4-211ENST00000522556 HTD2P86397 168 aa14.22□□□□□ -0.13
CLK4-211ENST00000522556 HES1Q14469 280 aa14.22□□□□□ -0.13
CLK4-211ENST00000522556 HERPUD1Q15011 391 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms