RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CST11Q9H112 138 aa16.33■□□□□ 0.2
SDCBP-209ENST00000522243 KCNK15Q9H427 330 aa16.33■□□□□ 0.2
SDCBP-209ENST00000522243 OR2S2Q9NQN1 319 aa16.33■□□□□ 0.2
SDCBP-209ENST00000522243 NUDT19A8MXV4 375 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 CA11O75493 328 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 MOSP00540 346 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 SLC35B1P78383 322 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 MED22Q15528 200 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 TRAT1Q6PIZ9 186 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 ETV3LQ6ZN32 361 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 C8orf86Q6ZUL3 223 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 LRRTM1Q86UE6 522 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 MS4A15Q8N5U1 240 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 LINC00482Q8N8I6 264 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 ABCG5Q9H222 651 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 DCLRE1BQ9H816 532 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 MBNL3Q9NUK0 354 aaKnown RBP16.32■□□□□ 0.2
SDCBP-209ENST00000522243 LIN7CQ9NUP9 197 aaKnown RBP16.32■□□□□ 0.2
SDCBP-209ENST00000522243 SCN3BQ9NY72 215 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 KCNIP1Q9NZI2 227 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 GHRLQ9UBU3 117 aa16.32■□□□□ 0.2
SDCBP-209ENST00000522243 LSM2Q9Y333 95 aaKnown RBP16.32■□□□□ 0.2
SDCBP-209ENST00000522243 GLAP06280 429 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 VSIG8P0DPA2 414 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 GPR12P47775 334 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 ZNF137PP52743 207 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 AQP4P55087 323 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 SPHARQ15513 63 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 TMEM30BQ3MIR4 351 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 MORN2Q502X0 79 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 RNLSQ5VYX0 342 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 GLT8D1Q68CQ7 371 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 OR2W3Q7Z3T1 314 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 CEACAM19Q7Z692 300 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 MRPL41Q8IXM3 137 aaKnown RBP16.31■□□□□ 0.2
SDCBP-209ENST00000522243 OR51D1Q8NGF3 324 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 NRG4Q8WWG1 115 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 RCC1LQ96I51 464 aaKnown RBP16.31■□□□□ 0.2
SDCBP-209ENST00000522243 S1PR3Q99500 378 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 SULT4A1Q9BR01 284 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 PLSCR3Q9NRY6 295 aa16.31■□□□□ 0.2
SDCBP-209ENST00000522243 TXNL1O43396 289 aa16.3■□□□□ 0.2
SDCBP-209ENST00000522243 THBS3P49746 956 aa16.3■□□□□ 0.2
SDCBP-209ENST00000522243 F2RL1P55085 397 aa16.3■□□□□ 0.2
SDCBP-209ENST00000522243 KLHL30-AS1Q8NEE0 82 aa16.3■□□□□ 0.2
SDCBP-209ENST00000522243 NEDD4LQ96PU5 975 aa16.3■□□□□ 0.2
SDCBP-209ENST00000522243 RASL11BQ9BPW5 248 aa16.3■□□□□ 0.2
SDCBP-209ENST00000522243 FAAP24Q9BTP7 215 aa16.3■□□□□ 0.2
SDCBP-209ENST00000522243 AP4M1O00189 453 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 UBBP0CG47 229 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 SRMP19623 302 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 CHATP28329 748 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 HOXD3P31249 432 aaPredicted RBP16.29■□□□□ 0.2
SDCBP-209ENST00000522243 PPP1CCP36873 323 aaKnown RBP16.29■□□□□ 0.2
SDCBP-209ENST00000522243 HSD17B12Q53GQ0 312 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 C1orf100Q5SVJ3 147 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 LIPKQ5VXJ0 399 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 LCNL1Q6ZST4 164 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 C6orf201Q7Z4U5 140 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 COMMD1Q8N668 190 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 PHYHIPQ92561 330 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 TMEM203Q969S6 136 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 DUX3Q96PT4 197 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 HSPB9Q9BQS6 159 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 NICN1Q9BSH3 213 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 TMEM59Q9BXS4 323 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 ZFP57Q9NU63 452 aa16.29■□□□□ 0.2
SDCBP-209ENST00000522243 LANCL1O43813 399 aa16.28■□□□□ 0.2
SDCBP-209ENST00000522243 HTR2CP28335 458 aa16.28■□□□□ 0.2
SDCBP-209ENST00000522243 KRTAP10-11P60412 298 aa16.28■□□□□ 0.2
SDCBP-209ENST00000522243 RPS27AP62979 156 aaKnown RBP16.28■□□□□ 0.2
SDCBP-209ENST00000522243 UNC119Q13432 240 aa16.28■□□□□ 0.2
SDCBP-209ENST00000522243 LSAMPQ13449 338 aa16.28■□□□□ 0.2
SDCBP-209ENST00000522243 IRF3Q14653 427 aa16.28■□□□□ 0.2
SDCBP-209ENST00000522243 STEAP3Q658P3 488 aa16.28■□□□□ 0.2
SDCBP-209ENST00000522243 ABHD14AQ9BUJ0 271 aa16.28■□□□□ 0.2
SDCBP-209ENST00000522243 JPT1Q9UK76 154 aa16.28■□□□□ 0.2
SDCBP-209ENST00000522243 K7EIL1 84 aa16.27■□□□□ 0.2
SDCBP-209ENST00000522243 DUS4LO95620 317 aaKnown RBP16.27■□□□□ 0.2
SDCBP-209ENST00000522243 RPLP1P05386 114 aaKnown RBP16.27■□□□□ 0.2
SDCBP-209ENST00000522243 HSMCR30P0CW71 290 aa16.27■□□□□ 0.2
SDCBP-209ENST00000522243 MYF6P23409 242 aa16.27■□□□□ 0.2
SDCBP-209ENST00000522243 PNLIPRP3Q17RR3 467 aa16.27■□□□□ 0.2
SDCBP-209ENST00000522243 TEX38Q6PEX7 206 aa16.27■□□□□ 0.2
SDCBP-209ENST00000522243 ODF3L1Q8IXM7 274 aa16.27■□□□□ 0.2
SDCBP-209ENST00000522243 UFD1Q92890 307 aa16.27■□□□□ 0.2
SDCBP-209ENST00000522243 YPEL1O60688 119 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 UCHL1P09936 223 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 SLC2A2P11168 524 aaPredicted RBP16.26■□□□□ 0.19
SDCBP-209ENST00000522243 BLVRBP30043 206 aaPredicted RBP16.26■□□□□ 0.19
SDCBP-209ENST00000522243 MYCNOSP40205 109 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 RPS25P62851 125 aaKnown RBP16.26■□□□□ 0.19
SDCBP-209ENST00000522243 HMGN3Q15651 99 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 ZNF554Q86TJ5 538 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 ZNF695Q8IW36 515 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 FAM71E2Q8N5Q1 922 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 OR8H1Q8NGG4 311 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 KCNG3Q8TAE7 436 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 SETD6Q8TBK2 473 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 GALMQ96C23 342 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms