RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 CDC42P60953 191 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 HMGCS1Q01581 520 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 SEMG2Q02383 582 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 GABRA6Q16445 453 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 C10orf91Q5T1B1 145 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 C12orf73Q69YU5 71 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 SLC25A25Q6KCM7 469 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 ULK3Q6PHR2 472 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 LYPD2Q6UXB3 125 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 NPSR1Q6W5P4 371 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 MBOAT2Q6ZWT7 520 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 CBLN2Q8IUK8 224 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 DEFB106AQ8N104 65 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 ZNF565Q8N9K5 539 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 Q8N9W7 124 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 OR10G2Q8NGC3 310 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 ACOT12Q8WYK0 555 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 TMEM158Q8WZ71 300 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 TCEAL3Q969E4 200 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 ELSPBP1Q96BH3 223 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 NARS2Q96I59 477 aaKnown RBP5.02□□□□□ -1.61
LSM1-202ENST00000520286 PKMYT1Q99640 499 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 PRSS16Q9NQE7 514 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 CD84Q9UIB8 345 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 NEU3Q9UQ49 428 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 SLC22A7Q9Y694 548 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 PATJQ8NI35 1801 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 WDR87Q6ZQQ6 2873 aa5.02□□□□□ -1.61
LSM1-202ENST00000520286 SCN1AP35498 2009 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 IGKV6-21A0A0C4DH24 114 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 A0A1B0GUH1 482 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 ARGFXA6NJG6 315 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 NCBP2LA6PVI3 153 aaKnown RBP5.01□□□□□ -1.61
LSM1-202ENST00000520286 HMSDA8MTL9 139 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 MCRIP1C9JLW8 97 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 M0QZ92 97 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 ZNF593O00488 134 aaPredicted RBP5.01□□□□□ -1.61
LSM1-202ENST00000520286 XRCC2O43543 280 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 OR1I1O60431 355 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 OR2A4O95047 310 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 ZNF682O95780 498 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 SOD1P00441 154 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 TRBC1P01850 177 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 CEACAM3P40198 252 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 CEACAM6P40199 344 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 CXCL5P42830 114 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 CYB561P49447 251 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 LCN2P80188 198 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 STX4Q12846 297 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 HTR4Q13639 388 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 TAF1AQ15573 450 aaPredicted RBP5.01□□□□□ -1.61
LSM1-202ENST00000520286 POU2AF1Q16633 256 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 SLC36A2Q495M3 483 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 TMEM255AQ5JRV8 349 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 THEM4Q5T1C6 240 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 SCIMPQ6UWF3 145 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 STX12Q86Y82 276 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 ZBTB8OSQ8IWT0 167 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 PDZD9Q8IXQ8 264 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 C12orf45Q8N5I9 185 aaPredicted RBP5.01□□□□□ -1.61
LSM1-202ENST00000520286 ARIH2OSQ8N7S6 290 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 TMEM104Q8NE00 496 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 OR52E2Q8NGJ4 325 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 OR52P1PQ8NH57 321 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 OR51F2Q8NH61 342 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 RNF185Q96GF1 192 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 OR2A7Q96R45 310 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 OR52E6Q96RD3 313 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 TCEAL7Q9BRU2 100 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 UTP23Q9BRU9 249 aaKnown RBP5.01□□□□□ -1.61
LSM1-202ENST00000520286 DPY30Q9C005 99 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 LINC00597Q9H2U6 94 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 CLEC2DQ9UHP7 191 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 CARHSP1Q9Y2V2 147 aaKnown RBP5.01□□□□□ -1.61
LSM1-202ENST00000520286 ANKRD11Q6UB99 2663 aaPredicted RBP5.01□□□□□ -1.61
LSM1-202ENST00000520286 ANKRD12Q6UB98 2062 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 FAM208BQ5VWN6 2430 aa5.01□□□□□ -1.61
LSM1-202ENST00000520286 IGLV1-36A0A0B4J1U3 117 aa5□□□□□ -1.61
LSM1-202ENST00000520286 C9orf170A2RU37 121 aa5□□□□□ -1.61
LSM1-202ENST00000520286 C2orf74A8MZ97 194 aa5□□□□□ -1.61
LSM1-202ENST00000520286 KLLNB2CW77 178 aa5□□□□□ -1.61
LSM1-202ENST00000520286 TNFRSF11BO00300 401 aa5□□□□□ -1.61
LSM1-202ENST00000520286 ENTPD6O75354 484 aa5□□□□□ -1.61
LSM1-202ENST00000520286 ATG12O94817 140 aa5□□□□□ -1.61
LSM1-202ENST00000520286 APOC3P02656 99 aa5□□□□□ -1.61
LSM1-202ENST00000520286 HLA-DQB2P05538 268 aa5□□□□□ -1.61
LSM1-202ENST00000520286 S100A9P06702 114 aaKnown RBP5□□□□□ -1.61
LSM1-202ENST00000520286 HOXC4P09017 264 aaPredicted RBP5□□□□□ -1.61
LSM1-202ENST00000520286 PMCHP20382 165 aa5□□□□□ -1.61
LSM1-202ENST00000520286 BMI1P35226 326 aa5□□□□□ -1.61
LSM1-202ENST00000520286 CDKN2CP42773 168 aa5□□□□□ -1.61
LSM1-202ENST00000520286 IDH2P48735 452 aaKnown RBP5□□□□□ -1.61
LSM1-202ENST00000520286 INPP1P49441 399 aa5□□□□□ -1.61
LSM1-202ENST00000520286 LHX2P50458 406 aa5□□□□□ -1.61
LSM1-202ENST00000520286 ZNF138P52744 262 aa5□□□□□ -1.61
LSM1-202ENST00000520286 TSPAN5P62079 268 aa5□□□□□ -1.61
LSM1-202ENST00000520286 RPS25P62851 125 aaKnown RBP5□□□□□ -1.61
LSM1-202ENST00000520286 RPL38P63173 70 aaKnown RBP5□□□□□ -1.61
LSM1-202ENST00000520286 C1DQ13901 141 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms