RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 NDUFAF7Q7L592 441 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 DEFB128Q7Z7B8 93 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 BAP18Q8IXM2 172 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 BPIFB2Q8N4F0 458 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 MFSD9Q8NBP5 474 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF740Q8NDX6 193 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR4K14Q8NGD5 310 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR5D16Q8NGK9 328 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR4C16Q8NGL9 310 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR10D4PQ8NGN7 298 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2A1Q8NGT9 310 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR13D1Q8NGV5 346 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2L8Q8NGY9 312 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR5AK2Q8NH90 309 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 LGALS14Q8TCE9 139 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SPRYD4Q8WW59 207 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR8D1Q8WZ84 308 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ADIPOR1Q96A54 375 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 MRGPRFQ96AM1 343 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 MS4A6EQ96DS6 147 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 TM4SF19Q96DZ7 209 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 NUS1Q96E22 293 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SMIM10Q96HG1 83 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 VSIG2Q96IQ7 327 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRRC1Q96M27 445 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 AMDHD1Q96NU7 426 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 YPEL2Q96QA6 119 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 S100A13Q99584 98 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 TIMM29Q9BSF4 260 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 C19orf24Q9BVV8 132 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 DDA1Q9BW61 102 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 TM2D1Q9BX74 207 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 PARD6GQ9BYG4 376 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC17A9Q9BYT1 436 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 AICDAQ9GZX7 198 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 FXYD6Q9H0Q3 95 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR51I1Q9H343 314 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 GLIPR2Q9H4G4 154 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 XKR8Q9H6D3 395 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SPACA1Q9HBV2 294 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 LPAR2Q9HBW0 351 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 APMAPQ9HDC9 416 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 MEPEQ9NQ76 525 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 PARP11Q9NR21 331 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 INPP5EQ9NRR6 644 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ASF1BQ9NVP2 202 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 TVP23BQ9NYZ1 205 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC23A2Q9UGH3 650 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC17A4Q9Y2C5 497 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR10H1Q9Y4A9 318 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 ALPK2Q86TB3 2170 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 FANCMQ8IYD8 2048 aa2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 GOLGB1Q14789 3259 aaKnown RBP2.37□□□□□ -2.03
HMGB1P41-201ENST00000520234 SNRNP200O75643 2136 aaKnown RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 KIAA1549LQ6ZVL6 1849 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 CACNA1CQ13936 2221 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 IGLV8-61A0A075B6I0 122 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 IGKV1-8A0A0C4DH67 115 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 FRG2CA6NGY1 282 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 IFITM5A6NNB3 132 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 C10orf142B7Z368 130 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 H0YL77 283 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 GOSR2O14653 212 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 CCL16O15467 120 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR1F1O43749 312 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ADAP1O75689 374 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 SERF1AO75920 110 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 LYPD3O95274 346 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 AIFM1O95831 613 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 TGFAP01135 160 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 HMGN2P05204 90 aaKnown RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 CD2P06729 351 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 CLUP10909 449 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 CCL5P13501 91 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF14P17017 642 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF25P17030 456 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 FGF7P21781 194 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 RPS4Y1P22090 263 aaKnown RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIST1H1TP22492 207 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 HTR2CP28335 458 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 BRS3P32247 399 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 APLNRP35414 380 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 PPICP45877 212 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 SULT1A1P50225 295 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 SULT1A2P50226 295 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 RND2P52198 227 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 FXYD6P3P58550 94 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 DEFB103AP81534 67 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 TGM3Q08188 693 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 FUT5Q11128 374 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRDX4Q13162 271 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 DHRS2Q13268 280 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 PDGFRLQ15198 375 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ELOBQ15370 118 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNHIT3Q15649 155 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ARHGAP11BQ3KRB8 267 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 C1orf194Q5T5A4 169 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF684Q5T5D7 378 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 PIP5KL1Q5T9C9 394 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC48A1Q6P1K1 146 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms