RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 TRMT12Q53H54 448 aaKnown RBP2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 C10orf91Q5T1B1 145 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 Q6ZRU5 148 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 Q8N402 240 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 TMEM156Q8N614 296 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 CYGBQ8WWM9 190 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 KCTD7Q96MP8 289 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 EBNA1BP2Q99848 306 aaKnown RBP2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 DHRS9Q9BPW9 319 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 KCNIP2Q9NS61 270 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 FAM206AQ9NX38 181 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 ZNF230Q9UIE0 474 aaPredicted RBP2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 LINC00588Q9Y4M8 146 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 SNX10Q9Y5X0 201 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 DNMT1P26358 1616 aaKnown RBP2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 GGTLC3B5MD39 225 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 F5H768 121 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 AZIN1O14977 448 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 KLHL2O95198 593 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 DEXIO95424 95 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 CPSF4O95639 269 aaKnown RBP2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 IGHMP01871 453 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 OPN1SWP03999 348 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 LINC00614P0C842 121 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 C8orf88P0DMB2 117 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 IFNGR2P38484 337 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 KRTAP10-8P60410 259 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 SMAGPQ0VAQ4 97 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 SLC9A3R2Q15599 337 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 MAPK14Q16539 360 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 SPATA31B1PQ5VZV4 182 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 DOLPP1Q86YN1 238 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 EIF4E3Q8N5X7 224 aaKnown RBP2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 YIPF7Q8N8F6 280 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 OR7D2Q96RA2 312 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 TM2D3Q9BRN9 247 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 NSRP1Q9H0G5 558 aaKnown RBP2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 MS4A6AQ9H2W1 248 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 PARVAQ9NVD7 372 aa2.77□□□□□ -1.97
HMGB1P46-201ENST00000520062 UNC13AQ9UPW8 1703 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 MAP3K5Q99683 1374 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 IGKV2-24A0A0C4DH68 120 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 IGKV1-12A0A0C4DH73 117 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 A0A1B0GU33 70 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 COPEO14579 308 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 SLC16A4O15374 487 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 SSNA1O43805 119 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 IGKV1D-12P01611 117 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 HBZP02008 142 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 APOEP02649 317 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 ZNF708P17019 499 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 MIPP30301 263 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 MAGOHP61326 146 aaKnown RBP2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 ZNF141Q15928 474 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 KRTAP25-1Q3LHN0 102 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 LRP11Q86VZ4 500 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 NATD1Q8N6N6 113 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 LINC00304Q8N9R0 145 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 TMEM75Q8N9X5 138 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 OR11G2Q8NGC1 345 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 ASB13Q8WXK3 278 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 HIST1H2BAQ96A08 127 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 TLCD1Q96CP7 247 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 GNB1LQ9BYB4 327 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 EIF5A2Q9GZV4 153 aaKnown RBP2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 SLC23A2Q9UGH3 650 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 THADAQ6YHU6 1953 aa2.76□□□□□ -1.97
HMGB1P46-201ENST00000520062 IGKV1D-37A0A075B6S9 117 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 LECT2O14960 151 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 EEF1E1O43324 174 aaKnown RBP2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 SYNGR2O43760 224 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 CRYBA1P05813 215 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 KRT7P08729 469 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 COX5BP10606 129 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 CDC34P49427 236 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 APOFQ13790 326 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 IHHQ14623 411 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 OR8G1Q15617 311 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 DEFB134Q4QY38 66 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 CDKL4Q5MAI5 379 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 PTRHD1Q6GMV3 140 aaKnown RBP2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 CALHM3Q86XJ0 350 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 ZNF664Q8N3J9 261 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 Q8NAQ8 132 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 OR10D3Q8NH80 312 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 ACY3Q96HD9 319 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 MBOAT7Q96N66 472 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 MROQ9BYG7 248 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 OR51B6Q9H340 312 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 FIS1Q9Y3D6 152 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 GPR179Q6PRD1 2367 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 NPATQ14207 1427 aa2.75□□□□□ -1.97
HMGB1P46-201ENST00000520062 TEX50A0A1B0GTY4 177 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 K7EQS6 105 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 PSCAO43653 123 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 NEFHP12036 1026 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 GABRA3P34903 492 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 OR1E2P47887 323 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms