RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 LRTM2Q8N967 370 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 NAXEQ8NCW5 288 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 OR4X1Q8NH49 305 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 FGFBP3Q8TAT2 258 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 PSMF1Q92530 271 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 SNX22Q96L94 193 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 STRADBQ9C0K7 418 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 LIME1Q9H400 295 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 NAA60Q9H7X0 242 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 ZNF286AQ9HBT8 521 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 SHANK1Q9Y566 2161 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 BORCS7-ASMTA0A0B4J1R7 106 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 GEMIN2O14893 280 aaKnown RBP8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 OPRM1P35372 400 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 RBM11P57052 281 aaKnown RBP8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 CCL20P78556 96 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 PAX5Q02548 391 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 MALLQ13021 153 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 PRDX4Q13162 271 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 TMEM187Q14656 261 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 ICAM4Q14773 271 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 PIGYQ3MUY2 71 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 PLCXD3Q63HM9 321 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 TMEM211Q6ICI0 200 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 Q8NFD4 153 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 ABHD3Q8WU67 409 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 ST3GAL6Q9Y274 331 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 URGCP-MRPS24S4R325 110 aa8.66□□□□□ -1.02
SH2D4A-204ENST00000519207 ARID1AO14497 2285 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 A0A1B0GU03 582 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 PINLYPA6NC86 204 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A10PA6NDY2 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A18PA6NE21 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A16PA6NEW6 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A20PA6NIJ5 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A8PA6NJQ4 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A7PA6NKC0 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A22PA8MWA6 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A12PA8MX19 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A5PA8MXJ8 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A23PA8MXZ1 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 E5RGE8 158 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 SCAF4O95104 1147 aaKnown RBP8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 OR4A8P0C604 315 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A15PP0C7V4 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A13PP0C7W8 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A14PP0C7W9 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM90A24PP0C7X0 464 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FUT3P21217 361 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 ABCA11PQ4W5N1 156 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 RTN4IP1Q8WWV3 396 aaPredicted RBP8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 PIGCQ92535 297 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 MRPL24Q96A35 216 aaKnown RBP8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 ZNF845Q96IR2 970 aaPredicted RBP8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 FAM173AQ9BQD7 235 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 SPRY4Q9C004 299 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 GAL3ST2Q9H3Q3 398 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 NCOR1P1Q9H4R4 102 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 SRD5A3Q9H8P0 318 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 CBLN4Q9NTU7 201 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 ZNF581Q9P0T4 197 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 GAB2Q9UQC2 676 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 NSG2Q9Y328 171 aa8.65□□□□□ -1.02
SH2D4A-204ENST00000519207 GPR137BO60478 399 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 MRPL33O75394 65 aaKnown RBP8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 IL6RP08887 468 aaPredicted RBP8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 RPP30P78346 268 aaKnown RBP8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 PNRC1Q12796 327 aaPredicted RBP8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 IQCJQ1A5X6 159 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 ARSJQ5FYB0 599 aaPredicted RBP8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 HES3Q5TGS1 186 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 TSPO2Q5TGU0 170 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 CPEB3Q8NE35 698 aaKnown RBP8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 TOMM40LQ969M1 308 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 MOB3AQ96BX8 217 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 ACY3Q96HD9 319 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 BBC3Q96PG8 261 aaPredicted RBP8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 NIPSNAP3BQ9BS92 247 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 SH3BGRL3Q9H299 93 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 LPAR2Q9HBW0 351 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 PLSCR2Q9NRY7 297 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 B4GALT7Q9UBV7 327 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 PCSK5Q92824 1860 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 PPP5D1E7EU14 171 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 CLDN34H7C241 214 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 CYB5R3P00387 301 aaPredicted RBP8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 OPN1MWP04001 364 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 OPN1MW2P0DN77 364 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 OPN1MW3P0DN78 364 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 CCKARP32238 428 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 BRS3P32247 399 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 PRSS12P56730 875 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 HLA-DRB3P79483 266 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 SRSF7Q16629 238 aaKnown RBP eCLIP8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 BTNL3Q6UXE8 466 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 LIAT1Q6ZQX7 453 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 Q6ZS49 121 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 CENPVQ7Z7K6 275 aaPredicted RBP8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 FOXRED2Q8IWF2 684 aa8.64□□□□□ -1.03
SH2D4A-204ENST00000519207 SAXO1Q8IYX7 474 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms