RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 PF4V1P10720 104 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 CD37P11049 281 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 RCC1P18754 421 aaPredicted RBP8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 SRMP19623 302 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 CD1BP29016 333 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 REG1BP48304 166 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 INSL4Q14641 139 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 IRF3Q14653 427 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 MED22Q15528 200 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 CT45A1Q5HYN5 189 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 C1orf100Q5SVJ3 147 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 SIGIRRQ6IA17 410 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 C10orf99Q6UWK7 81 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 SLC25A48Q6ZT89 311 aaKnown RBP8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 ZNF554Q86TJ5 538 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 IZUMO1Q8IYV9 350 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 OR2T10Q8NGZ9 312 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 OR1L1Q8NH94 360 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 CT45A3Q8NHU0 189 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 CHPT1Q8WUD6 406 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 RTN4IP1Q8WWV3 396 aaPredicted RBP8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 FAM46BQ96A09 425 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 EAF1Q96JC9 268 aaPredicted RBP8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 NEDD4LQ96PU5 975 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 TAF9BQ9HBM6 251 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 NECAP2Q9NVZ3 263 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 SCOCQ9UIL1 159 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 IGHV3-72A0A0B4J1Y9 119 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 NCBP2LA6PVI3 153 aaKnown RBP8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 SERPINE3A8MV23 424 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 SLC31A2O15432 143 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 IGHG2P01859 326 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 CD33P20138 364 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 ZNF134P52741 427 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 SLC35A2P78381 396 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 HSD17B12Q53GQ0 312 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 RBM48Q5RL73 367 aaKnown RBP8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 FAM27D1Q5T7N8 215 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 TGIF2LXQ8IUE1 241 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 PRR18Q8N4B5 295 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 Q8N6K4 173 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 ZNF439Q8NDP4 499 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 OR10V1Q8NGI7 309 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 KCNG3Q8TAE7 436 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 SGCDQ92629 289 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 UFD1Q92890 307 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 DUSP21Q9H596 190 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 ISYNA1Q9NPH2 558 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 OR2S2Q9NQN1 319 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 MBNL3Q9NUK0 354 aaKnown RBP8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 RAB26Q9ULW5 256 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 CSMD3Q7Z407 3707 aa8.36□□□□□ -1.07
PDGFRB-203ENST00000517660 RYR1P21817 5038 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 SLC22A1O15245 554 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 TXNL1O43396 289 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 RGS10O43665 173 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 MOSP00540 346 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 PF4P02776 101 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 UCHL1P09936 223 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 MYF6P23409 242 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 HTR2CP28335 458 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 ZNF137PP52743 207 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 RPS27AP62979 156 aaKnown RBP8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 SLC35B1P78383 322 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 HTD2P86397 168 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 TPBGQ13641 420 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 MORN2Q502X0 79 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 KHDC1LQ5JSQ8 128 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 NKAPLQ5M9Q1 402 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 LIPKQ5VXJ0 399 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 OR10K2Q6IF99 312 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 SLC35E3Q7Z769 313 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 ZNF329Q86UD4 541 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 FOXRED2Q8IWF2 684 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 COMMD1Q8N668 190 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 OR8H1Q8NGG4 311 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 OR52L2PQ8NGH6 319 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 MRPL30Q8TCC3 161 aaKnown RBP8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 TMEM203Q969S6 136 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 NOL4LQ96MY1 436 aaPredicted RBP8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 TMEM59Q9BXS4 323 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 ANKRD60Q9BZ19 345 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 PLSCR3Q9NRY6 295 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 LIN7CQ9NUP9 197 aaKnown RBP8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 JPT1Q9UK76 154 aa8.35□□□□□ -1.07
PDGFRB-203ENST00000517660 HUWE1Q7Z6Z7 4374 aaKnown RBP8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 TMEM14DPA8MWL7 114 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 ZNF736B4DX44 427 aaPredicted RBP8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 LANCL1O43813 399 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 RGS11O94810 467 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 BPNT1O95861 308 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 HSMCR30P0CW71 290 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 IGLL1P15814 213 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 PSMA1P25786 263 aaKnown RBP8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 CHATP28329 748 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 GPR12P47775 334 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 QRFPP83859 136 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 TRAM1Q15629 374 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 LY6G6FQ5SQ64 297 aa8.34□□□□□ -1.07
PDGFRB-203ENST00000517660 Q8N9W7 124 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms