RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 CCL1P22362 96 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 ALDH3A1P30838 453 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 RAB4BP61018 213 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 RAP1AP62834 184 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 GNG3P63215 75 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 HIST1H3AP68431 136 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 H3F3AP84243 136 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 FABP5Q01469 135 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 FAM201AQ5SY85 155 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 HES3Q5TGS1 186 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 C3orf33Q6P1S2 294 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 GUSBP11Q6P575 273 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 HIST2H3AQ71DI3 136 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 FA2HQ7L5A8 372 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 PDPNQ86YL7 162 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 UBL4BQ8N7F7 174 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 SLC25A29Q8N8R3 303 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 OR9I1Q8NGQ6 314 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 ACY3Q96HD9 319 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 ZNF414Q96IQ9 312 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 CEP170P1Q96L14 293 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 DERL3Q96Q80 235 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 OR51I2Q9H344 312 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 PLSCR3Q9NRY6 295 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 CMTM6Q9NX76 183 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 UFC1Q9Y3C8 167 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 GRIN2BQ13224 1484 aa3.9□□□□□ -1.79
CTNNA1-202ENST00000517533 DHX57Q6P158 1386 aaKnown RBP3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 PIK3C2GO75747 1445 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 NPATQ14207 1427 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 NCOA1Q15788 1441 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 IGLV11-55A0A075B6I3 123 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 IGHV5-10-1A0A0J9YXX1 117 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 FAM236DA0A1B0GTK5 79 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 EXOC1LA0A1B0GW35 172 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 ZNF850A8MQ14 1090 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 INMT-MINDY4F8WBC2 141 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 IFNA1P01562 189 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 IGHV3-11P01762 117 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 CRYGDP07320 174 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 FAM236CP0DP71 79 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 CTSEP14091 401 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 CTLA4P16410 223 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 NELFEP18615 380 aaKnown RBP3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 DDTP30046 118 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 CMC4P56277 68 aaPredicted RBP3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 EBPQ15125 230 aaKnown RBP3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 TCF23Q7RTU1 214 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 DEFB125Q8N687 156 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 CD177Q8N6Q3 437 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 COQ8AQ8NI60 647 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 APOBEC3DQ96AK3 386 aaPredicted RBP3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 ANKRD36BP1Q96IX9 119 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 OR7D2Q96RA2 312 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 HES4Q9HCC6 221 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 C14orf105Q9NVL8 296 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 TAS2R1Q9NYW7 299 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 MRPL27Q9P0M9 148 aaKnown RBP3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 LINC00527Q9UJ94 153 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 UTP11Q9Y3A2 253 aaKnown RBP3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 TSPOAP1O95153 1857 aa3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 GPATCH8Q9UKJ3 1502 aaKnown RBP3.89□□□□□ -1.79
CTNNA1-202ENST00000517533 ATRNO75882 1429 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 NOS1P29475 1434 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 CFTRP13569 1480 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 C4orf51C9J302 202 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 H0YJW9 148 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 FAAHO00519 579 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 MRASO14807 208 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 EIF1BO60739 113 aaKnown RBP3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 TTRP02766 147 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 NBEAP1P0C6P0 100 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 OR12D1P0DN82 309 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 ORM2P19652 201 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 ELK4P28324 431 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 EIF1P41567 113 aaKnown RBP3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 PSMB3P49720 205 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 ZNF133P52736 654 aaPredicted RBP3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 BTN3A2P78410 334 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 TFAMQ00059 246 aaKnown RBP3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 IL17AQ16552 155 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 RNASE13Q5GAN3 156 aaKnown RBP3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 FAM78BQ5VT40 261 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 LPCAT3Q6P1A2 487 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 PHF13Q86YI8 300 aaPredicted RBP3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 C15orf56Q8N910 161 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 OR4K5Q8NGD3 323 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 OR10K1Q8NGX5 313 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 JOSD2Q8TAC2 188 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 SLC25A44Q96H78 314 aaPredicted RBP3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 SLC35G5Q96KT7 338 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 OR2A5Q96R48 311 aa3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 RNASE7Q9H1E1 156 aaKnown RBP3.88□□□□□ -1.79
CTNNA1-202ENST00000517533 DYSFO75923 2080 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 TMEM150BA6NC51 233 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 PHOX2AO14813 284 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 CHST10O43529 356 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 S1PR2O95136 353 aa3.87□□□□□ -1.79
CTNNA1-202ENST00000517533 PFN1P07737 140 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms