RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ZNF17P17021 662 aa5.76□□□□□ -1.49
CPNE3-203ENST00000517490 HNF1AP20823 631 aa5.76□□□□□ -1.49
CPNE3-203ENST00000517490 CTSSP25774 331 aa5.76□□□□□ -1.49
CPNE3-203ENST00000517490 CYP2G1PQ6ZSU1 146 aa5.76□□□□□ -1.49
CPNE3-203ENST00000517490 GTF3AQ92664 365 aaKnown RBP5.76□□□□□ -1.49
CPNE3-203ENST00000517490 GPR146Q96CH1 333 aa5.76□□□□□ -1.49
CPNE3-203ENST00000517490 C14orf144Q96I85 54 aa5.76□□□□□ -1.49
CPNE3-203ENST00000517490 SLC35D1Q9NTN3 355 aa5.76□□□□□ -1.49
CPNE3-203ENST00000517490 GNG12Q9UBI6 72 aa5.76□□□□□ -1.49
CPNE3-203ENST00000517490 TRBV24-1A0A075B6N3 115 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 IGKV1D-8A0A087WSZ0 117 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 A0A096LPE4 126 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 A0A1W2PPZ6 126 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 OR5B21A6NL26 309 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 CEACAM6P40199 344 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 ZNF816Q0VGE8 651 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-203ENST00000517490 SNAI3Q3KNW1 292 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 WDR25Q64LD2 544 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-203ENST00000517490 WDR74Q6RFH5 385 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-203ENST00000517490 Q6ZS52 159 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 SPRED2Q7Z698 418 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 CADM4Q8NFZ8 388 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 OR10G8Q8NGN5 311 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 POC1BQ8TC44 478 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 TAF15Q92804 592 aaKnown RBP eCLIP5.75□□□□□ -1.49
CPNE3-203ENST00000517490 GALMQ96C23 342 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 HIST1H2BLQ99880 126 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 ABHD14AQ9BUJ0 271 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 ATP23Q9Y6H3 246 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 CACNA1IQ9P0X4 2223 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 FCN1O00602 326 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 SOD3P08294 240 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 NDUFB7P17568 137 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 UCP1P25874 307 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 NXPH1P58417 271 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 FGF12P61328 243 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 COL10A1Q03692 680 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 HYAL1Q12794 435 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 TBC1D28Q2M2D7 210 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 COX19Q49B96 90 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 WDR73Q6P4I2 378 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 ZNF818PQ6ZRF7 136 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 OR5AU1Q8NGC0 362 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 RBKSQ9H477 322 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 IL36GQ9NZH8 169 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 IGHV1OR15-9A0A0B4J2B8 117 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 PMS2P1A4D2B8 440 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 A6NJY4 79 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 SCTP09683 121 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 GABRA2P47869 451 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 CYB561P49447 251 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 TLE1Q04724 770 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 TCTEX1D1Q8N7M0 179 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 OR4X1Q8NH49 305 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 LYPD6BQ8NI32 183 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 TMEM54Q969K7 222 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 LSM10Q969L4 123 aaKnown RBP5.75□□□□□ -1.49
CPNE3-203ENST00000517490 RCC1LQ96I51 464 aaKnown RBP5.75□□□□□ -1.49
CPNE3-203ENST00000517490 C2orf88Q9BSF0 95 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 TAAR3PQ9P1P4 343 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 ZNF319Q9P2F9 582 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 MPC1Q9Y5U8 109 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 COL4A3Q01955 1670 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 TRAV1-1A0A0B4J248 108 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 TMEM30CPA0ZSE6 113 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 FAM90A26D6RGX4 464 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 SRD5A2P31213 254 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 ERVFC1-1P60608 527 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 SLC25A53Q5H9E4 307 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 RTN4RL2Q86UN3 420 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 BMPERQ8N8U9 685 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 ZNF501Q96CX3 271 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-203ENST00000517490 KLHDC3Q9BQ90 382 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 MESP1Q9BRJ9 268 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 STRADBQ9C0K7 418 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 MTCH1Q9NZJ7 389 aa5.75□□□□□ -1.49
CPNE3-203ENST00000517490 SCN5AQ14524 2016 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 SLC22A20A6NK97 555 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 VENTXO95231 258 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 MGST1P10620 155 aaKnown RBP5.74□□□□□ -1.49
CPNE3-203ENST00000517490 SELEP16581 610 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 ERVFRD-1P60508 538 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 LCN2P80188 198 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 IL15RAQ13261 267 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 IGFBP7Q16270 282 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 RPEL1Q2QD12 228 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 COL5A1-AS1Q5SY13 56 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 FAM162BQ5T6X4 162 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 ZNF468Q5VIY5 522 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-203ENST00000517490 GFI1BQ5VTD9 330 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 TIPARPQ7Z3E1 657 aaKnown RBP5.74□□□□□ -1.49
CPNE3-203ENST00000517490 ZNF439Q8NDP4 499 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 OR4C12Q96R67 309 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 ATG2BQ96BY7 2078 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 CEACAM1P13688 526 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 OR3A1P47881 315 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 EDDM3BP56851 147 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 LYSMD4Q5XG99 296 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 SAXO1Q8IYX7 474 aa5.74□□□□□ -1.49
CPNE3-203ENST00000517490 ZNF441Q8N8Z8 693 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms