RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 CT45A5P0DMU8 189 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CT45A7P0DMV0 189 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CCL3P10147 92 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 RALBP11234 206 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 LAP3P28838 519 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CA5AP35218 305 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 MDH1P40925 334 aaKnown RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 RFC3P40938 356 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PPICP45877 212 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 NAPAP54920 295 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CAV3P56539 151 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CLDN18P56856 261 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 YWHAGP61981 247 aaKnown RBP eCLIP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 RPL10AP62906 217 aaKnown RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 FAM3AP98173 230 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 EIF3IQ13347 325 aaKnown RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 USF2Q15853 346 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 NDUFA5Q16718 116 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 DEFB135Q30KP9 77 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CT45A1Q5HYN5 189 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TMEM31Q5JXX7 168 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 RBM48Q5RL73 367 aaKnown RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 STEAP4Q687X5 459 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 H2BFWTQ7Z2G1 175 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SPATA12Q7Z6I5 190 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 MTERF4Q7Z6M4 381 aaKnown RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PHF13Q86YI8 300 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TUSC5Q8IXB3 177 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 RPP25LQ8N5L8 163 aaKnown RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CNEP1R1Q8N9A8 125 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 OR5B17Q8NGF7 314 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CLDND2Q8NHS1 167 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CT45A3Q8NHU0 189 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 THRSPQ92748 146 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TBRG4Q969Z0 631 aaKnown RBP eCLIP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 FAM19A4Q96LR4 140 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 LYSMD1Q96S90 227 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ATP6V0BQ99437 205 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 MRPL13Q9BYD1 178 aaKnown RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 MRPS26Q9BYN8 205 aaKnown RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ILKAPQ9H0C8 392 aaPredicted RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PSTPIP2Q9H939 334 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PFDN4Q9NQP4 134 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CD300AQ9UGN4 299 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PRO0255Q9UI72 69 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TBC1D24Q9ULP9 559 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 C14orf166Q9Y224 244 aaKnown RBP-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CCL27Q9Y4X3 112 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PIK3R4Q99570 1358 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CADPSQ9ULU8 1353 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CUX2O14529 1486 aa-1.77□□□□□ -2.69
RNU6-1238P-201ENST00000517215 DNAH5Q8TE73 4624 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TRAV38-1A0A0B4J264 116 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TRIM64A6NGJ6 449 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TRIM64BA6NI03 449 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CD300LBA8K4G0 201 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 LYRM9A8MSI8 78 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 FAM25EA8MYX2 175 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SMKR1H3BMG3 65 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CRXO43186 299 aaPredicted RBP-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ZMPSTE24O75844 475 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 OR5F1O95221 314 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CLIC3O95833 236 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 AGTP01019 485 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 NPYP01303 97 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 LTAP01374 205 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 HLA-HP01893 362 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CD14P08571 375 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 LGALS1P09382 135 aaKnown RBP-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 METTL15P1P0C7V9 234 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PGA4P0DJD7 388 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PGA3P0DJD8 388 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PGA5P0DJD9 388 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SCGB1C2P0DMR2 95 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SFTPCP11686 197 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 NT5EP21589 574 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 NPPCP23582 126 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 PBLDP30039 288 aaPredicted RBP-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CCR1P32246 355 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SERPINB10P48595 397 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 GTF2BQ00403 316 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SEMG2Q02383 582 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 STX5Q13190 355 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 DDX39BQ13838 428 aaKnown RBP-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SCARB2Q14108 478 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 OR1Q1Q15612 314 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 CEACAM21Q3KPI0 293 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 GGTA1PQ4G0N0 100 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 GLYATL3Q5SZD4 288 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 REEP3Q6NUK4 255 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 DRAM2Q6UX65 266 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 C12orf54Q6X4T0 127 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 TPGS1Q6ZTW0 290 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SSX7Q7RTT5 188 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ZNF410Q86VK4 478 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 SERPINA12Q8IW75 414 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 C10orf67Q8IYJ2 551 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 ATAD1Q8NBU5 361 aa-1.78□□□□□ -2.69
RNU6-1238P-201ENST00000517215 OR52R1Q8NGF1 315 aa-1.78□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms