RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 KCTD9Q7L273 389 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 DPPA2Q7Z7J5 298 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SGPP2Q8IWX5 399 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SAXO1Q8IYX7 474 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SLC38A6Q8IZM9 456 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SPAG16Q8N0X2 631 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 FAM71E2Q8N5Q1 922 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 COMMD1Q8N668 190 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CCDC71LQ8N9Z2 235 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 ADAD2Q8NCV1 583 aaKnown RBP3.14□□□□□ -1.91
CAST-242ENST00000515063 OR13G1Q8NGZ3 307 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 OR2V1Q8NHB1 315 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CASTOR1Q8WTX7 329 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 DCUN1D4Q92564 292 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 GTF3AQ92664 365 aaKnown RBP3.14□□□□□ -1.91
CAST-242ENST00000515063 ARL11Q969Q4 196 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CPNE4Q96A23 557 aaPredicted RBP3.14□□□□□ -1.91
CAST-242ENST00000515063 SGK3Q96BR1 496 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 BORCS8Q96FH0 119 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 ABHD14BQ96IU4 210 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SEC22AQ96IW7 307 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SMIM8Q96KF7 97 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 IP6K3Q96PC2 410 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 DDA1Q9BW61 102 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 RBM24Q9BX46 236 aaKnown RBP3.14□□□□□ -1.91
CAST-242ENST00000515063 SEC11CQ9BY50 192 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SLC5A7Q9GZV3 580 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 BANF2Q9H503 90 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 OPA3Q9H6K4 179 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 FN3KRPQ9HA64 309 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 RHOFQ9HBH0 211 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 MMP26Q9NRE1 261 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CYTL1Q9NRR1 136 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 TMEM38BQ9NVV0 291 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 NECAP2Q9NVZ3 263 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SLC39A1Q9NY26 324 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 TAS2R3Q9NYW6 316 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 EHFQ9NZC4 300 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 ZNF230Q9UIE0 474 aaPredicted RBP3.14□□□□□ -1.91
CAST-242ENST00000515063 ANXA10Q9UJ72 324 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SLC7A11Q9UPY5 501 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 PIGLQ9Y2B2 252 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CARHSP1Q9Y2V2 147 aaKnown RBP3.14□□□□□ -1.91
CAST-242ENST00000515063 TIMM10BQ9Y5J6 103 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CSAG2Q9Y5P2 127 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 TNRC6AQ8NDV7 1962 aaKnown RBP3.14□□□□□ -1.91
CAST-242ENST00000515063 REV3LO60673 3130 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 MYO7BQ6PIF6 2116 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 TRBV6-6A0A0A6YYG2 114 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 ZNF816-ZNF321PA0A0X1KG74 233 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 C13orf42A0A1B0GVH6 325 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 A0A1W2PPI3 338 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 ZNF724A8MTY0 619 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 FAM25EA8MYX2 175 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 SMIM1B2RUZ4 78 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 E5RGE8 158 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 F5H5K5 113 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 TRIM77I1YAP6 450 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 TOR1AO14656 332 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 TNFSF11O14788 317 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 PDCD6O75340 191 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 DEDDO75618 318 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 ATG12O94817 140 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 SNAPINO95295 136 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 FARS2O95363 451 aaKnown RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 CST4P01036 141 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 NRASP01111 189 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 HPNP05981 417 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 LIPFP07098 398 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 MMP7P09237 267 aaPredicted RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 CTXN2P0C2S0 81 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 SEC11BP0C7V7 166 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 FAM157CP0CG43 387 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 OR5H8P0DN80 308 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 SLC2A1P11166 492 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 PGAM2P15259 253 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 CTRB1P17538 263 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 SERPINA2P20848 420 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 FUT3P21217 361 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 GLRA1P23415 457 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 NPY4RP50391 375 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 RAB5CP51148 216 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 RND3P61587 244 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 PSG4Q00888 419 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 FLI1Q01543 452 aaPredicted RBP3.13□□□□□ -1.91
CAST-242ENST00000515063 PJVKQ0ZLH3 352 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 PDZK1IP1Q13113 114 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 TMEM187Q14656 261 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 RSU1Q15404 277 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 HMGN3Q15651 99 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 MPV17LQ2QL34 196 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 ANKRD55Q3KP44 614 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 PABPC1L2AQ5JQF8 200 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 DCAF12Q5T6F0 453 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 PRAMEF20Q5VT98 475 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 CTRB2Q6GPI1 263 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 AAED1Q7RTV5 226 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 LINC00596Q86U02 117 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 LGI3Q8N145 548 aa3.13□□□□□ -1.91
CAST-242ENST00000515063 OSR2Q8N2R0 312 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms