RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 RNF133Q8WVZ7 376 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 RPL3LQ92901 407 aaKnown RBP2.82□□□□□ -1.96
NUP54-212ENST00000513248 TMIGD2Q96BF3 282 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 SGK3Q96BR1 496 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 NRBF2Q96F24 287 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 IL4I1Q96RQ9 567 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 CNN2Q99439 309 aaKnown RBP2.82□□□□□ -1.96
NUP54-212ENST00000513248 TBX5Q99593 518 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 CCL13Q99616 98 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 NMNAT2Q9BZQ4 307 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 YIPF3Q9GZM5 350 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 PBOV1Q9GZY1 135 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 TMEM165Q9HC07 324 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 SLC25A19Q9HC21 320 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 MMP26Q9NRE1 261 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 TECRQ9NZ01 308 aaKnown RBP2.82□□□□□ -1.96
NUP54-212ENST00000513248 ZNF581Q9P0T4 197 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 ZNF391Q9UJN7 358 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 SLC7A11Q9UPY5 501 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 CAB39Q9Y376 341 aaPredicted RBP2.82□□□□□ -1.96
NUP54-212ENST00000513248 RHBDD3Q9Y3P4 386 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 AP4S1Q9Y587 144 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 MPC1Q9Y5U8 109 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 FREM1Q5H8C1 2179 aa2.82□□□□□ -1.96
NUP54-212ENST00000513248 AKAP6Q13023 2319 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 KIR2DS1A0A191URI9 304 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 A0A1B0GVI7 797 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 A0A1W2PRD5 423 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 A0A1W2PRF3 423 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 A0A1W2PRM7 423 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 C5orf63A6NC05 138 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 C5orf51A6NDU8 294 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 TMEM210A6NLX4 147 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 SNTNA6NMZ2 147 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 H3BSH0 61 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 M0R129 80 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 AKR7A2O43488 359 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 PRKYO43930 277 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 ZNF254O75437 659 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 BAG2O95816 211 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 ECDO95905 644 aaPredicted RBP2.81□□□□□ -1.96
NUP54-212ENST00000513248 SERPINA3P01011 423 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 NRASP01111 189 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 PSKH1P11801 424 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 ATP6V1B1P15313 513 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 MUC1P15941 1255 aaPredicted RBP2.81□□□□□ -1.96
NUP54-212ENST00000513248 DAPP51397 102 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 GPM6AP51674 278 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 CDC42P60953 191 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 CXCR4P61073 352 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 ARF6P62330 175 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 UBA52P62987 128 aaKnown RBP2.81□□□□□ -1.96
NUP54-212ENST00000513248 GNG3P63215 75 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 CDK5Q00535 292 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 RIPPLY1Q0D2K3 151 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 BNIP1Q12981 228 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 ATP6AP1Q15904 470 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 RSPO1Q2MKA7 263 aaPredicted RBP2.81□□□□□ -1.96
NUP54-212ENST00000513248 LINC01590Q5TEZ4 76 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 HAGHLQ6PII5 290 aaPredicted RBP2.81□□□□□ -1.96
NUP54-212ENST00000513248 ZNF322Q6U7Q0 402 aaPredicted RBP2.81□□□□□ -1.96
NUP54-212ENST00000513248 BRD3OSQ6XYD6 125 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 ASRGL1Q7L266 308 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 SLC35F2Q8IXU6 374 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 ZNF679Q8IYX0 411 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 LINC00612Q8N6U2 182 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 TMEM185AQ8NFB2 350 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 OR1M1Q8NGA1 313 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 OR10H4Q8NGA5 316 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 TRMT10AQ8TBZ6 339 aaKnown RBP2.81□□□□□ -1.96
NUP54-212ENST00000513248 OR51E1Q8TCB6 317 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 PCNPQ8WW12 178 aaKnown RBP2.81□□□□□ -1.96
NUP54-212ENST00000513248 STMN2Q93045 179 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 LHX4Q969G2 390 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 FAM46BQ96A09 425 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 MRPL48Q96GC5 212 aaKnown RBP2.81□□□□□ -1.96
NUP54-212ENST00000513248 AMELYQ99218 206 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 MYCBPQ99417 103 aaPredicted RBP2.81□□□□□ -1.96
NUP54-212ENST00000513248 TEAD3Q99594 435 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 APOL4Q9BPW4 351 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 NEK6Q9HC98 313 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 GPR84Q9NQS5 396 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 PRR34Q9NV39 138 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 OPN4Q9UHM6 478 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 ENPP5Q9UJA9 477 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 GNG8Q9UK08 70 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 PIGLQ9Y2B2 252 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 POLDIP2Q9Y2S7 368 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 HIVEP2P31629 2446 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 FLNAP21333 2647 aaKnown RBP2.81□□□□□ -1.96
NUP54-212ENST00000513248 CSMD2Q7Z408 3487 aa2.81□□□□□ -1.96
NUP54-212ENST00000513248 TLN2Q9Y4G6 2542 aa2.8□□□□□ -1.96
NUP54-212ENST00000513248 MDFIC2A0A1B0GVS7 189 aa2.8□□□□□ -1.96
NUP54-212ENST00000513248 FAM230AA0A1W2PPH8 454 aa2.8□□□□□ -1.96
NUP54-212ENST00000513248 A0A1W2PRV1 198 aa2.8□□□□□ -1.96
NUP54-212ENST00000513248 DAPL1A0PJW8 107 aa2.8□□□□□ -1.96
NUP54-212ENST00000513248 CCDC182A6NF36 153 aa2.8□□□□□ -1.96
NUP54-212ENST00000513248 A6NIN4 97 aa2.8□□□□□ -1.96
NUP54-212ENST00000513248 METTL15A6NJ78 407 aa2.8□□□□□ -1.96
NUP54-212ENST00000513248 OR5B21A6NL26 309 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms