RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 BMPERQ8N8U9 685 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 PTX4Q96A99 478 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 MANBALQ9NQG1 85 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 G6PC2Q9NQR9 355 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 DEDDO75618 318 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 ADAP1O75689 374 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 TIMP3P35625 211 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 RPL8P62917 257 aaKnown RBP3.67□□□□□ -1.82
VCAN-209ENST00000513016 TEPPQ6URK8 271 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 TMEM179BQ7Z7N9 219 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 PRSS3P2Q8NHM4 247 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 IL22RA2Q969J5 263 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 IMMP1LQ96LU5 166 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 NAA50Q9GZZ1 169 aaKnown RBP3.67□□□□□ -1.82
VCAN-209ENST00000513016 RANGRFQ9HD47 186 aaPredicted RBP3.67□□□□□ -1.82
VCAN-209ENST00000513016 LYRM2Q9NU23 88 aaPredicted RBP3.67□□□□□ -1.82
VCAN-209ENST00000513016 UFC1Q9Y3C8 167 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 NUMA1Q14980 2115 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 CD1AP06126 327 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 REG1BP48304 166 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 PSG9Q00887 426 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 Q1RN00 199 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 MRPL30Q8TCC3 161 aaKnown RBP3.67□□□□□ -1.82
VCAN-209ENST00000513016 SIRT7Q9NRC8 400 aa3.67□□□□□ -1.82
VCAN-209ENST00000513016 ZNF230Q9UIE0 474 aaPredicted RBP3.67□□□□□ -1.82
VCAN-209ENST00000513016 OIP5O43482 229 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 CDS2O95674 445 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 P2RY1P47900 373 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 BATFQ16520 125 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 SIGLECL1Q8N7X8 197 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 C3orf56Q8N813 242 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 WDYHV1Q96HA8 205 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 NOL4LQ96MY1 436 aaPredicted RBP3.66□□□□□ -1.82
VCAN-209ENST00000513016 ABHD1Q96SE0 405 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 ZNF385DQ9H6B1 395 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 NEU3Q9UQ49 428 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 CASP8AP2Q9UKL3 1982 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 OR2H2O95918 312 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 TRGV3P03979 118 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 OR5AC1P0C628 307 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 ZNF708P17019 499 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 EFNA4P52798 201 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 LCN2P80188 198 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 MSRB3Q8IXL7 192 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 TMEM116Q8NCL8 245 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 SLC25A28Q96A46 364 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 LURAP1Q96LR2 239 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 CCL28Q9NRJ3 127 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 ST6GALNAC2Q9UJ37 374 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 DTX4Q9Y2E6 619 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 U3KQ87 197 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 COL4A5P29400 1685 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 KIAA1324LA8MWY0 1029 aaPredicted RBP3.66□□□□□ -1.82
VCAN-209ENST00000513016 CDC42EP2O14613 210 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 HSBP1O75506 76 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 MGPP08493 103 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 MYOD1P15172 320 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 RAG2P55895 527 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 BSPH1Q075Z2 132 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 ZIC4Q8N9L1 334 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 GPX7Q96SL4 187 aaPredicted RBP3.66□□□□□ -1.82
VCAN-209ENST00000513016 CYB5R1Q9UHQ9 305 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 MOB4Q9Y3A3 225 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 IGLV3-12A0A075B6K2 115 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 MAP1LC3B2A6NCE7 125 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 OR4C45A6NMZ5 311 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 C17orf100A8MU93 164 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 BCL2L11O43521 198 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 OR2C1O95371 312 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 IGKV1D-16P01601 117 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 NTF3P20783 257 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 C10orf128Q5T292 105 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 PPP1R1CQ8WVI7 109 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 MS4A3Q96HJ5 214 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 MAP1LC3BQ9GZQ8 125 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 KCNK15Q9H427 330 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 SLC6A13Q9NSD5 602 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 C17orf51A8MQB3 221 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 CTDSPLO15194 276 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 C1QBP02746 253 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 VSIG10L2P0DP72 767 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 RPL7P18124 248 aaKnown RBP3.66□□□□□ -1.82
VCAN-209ENST00000513016 FXYD3Q14802 87 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 LYRM7Q5U5X0 104 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 SPANXN1Q5VSR9 72 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 SP5Q6BEB4 398 aaPredicted RBP3.66□□□□□ -1.82
VCAN-209ENST00000513016 C11orf87Q6NUJ2 197 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 WDR73Q6P4I2 378 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 GAPTQ8N292 157 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 ORAI1Q96D31 301 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 SLC25A33Q9BSK2 321 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 NPVFQ9HCQ7 196 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 MRPL22Q9NWU5 206 aaKnown RBP3.66□□□□□ -1.82
VCAN-209ENST00000513016 COL5A3P25940 1745 aaPredicted RBP3.66□□□□□ -1.82
VCAN-209ENST00000513016 LOC102723971A0A1B0GUV8 181 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 C9orf170A2RU37 121 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 MPDU1O75352 247 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 NEURL1O76050 574 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 TIAF1O95411 115 aa3.66□□□□□ -1.82
VCAN-209ENST00000513016 GABRB1P18505 474 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms