RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 TXNL1O43396 289 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 CDRT1O95170 752 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 MOSP00540 346 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 NHLRC4P0CG21 123 aaPredicted RBP5.65□□□□□ -1.5
USP46-208ENST00000512656 GTF2F2P13984 249 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 GABRB1P18505 474 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 DCKP27707 260 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 CD1BP29016 333 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 BDKRB2P30411 391 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 ZNF93P35789 620 aaPredicted RBP5.65□□□□□ -1.5
USP46-208ENST00000512656 RPS19P39019 145 aaKnown RBP5.65□□□□□ -1.5
USP46-208ENST00000512656 GPR12P47775 334 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 RAB25P57735 213 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 MED21Q13503 144 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 GPR50Q13585 617 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 DIAPH2-AS1Q14236 149 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 TMEM30BQ3MIR4 351 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 UTF1Q5T230 341 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 ATAD3CQ5T2N8 411 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 DDI2Q5TDH0 399 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 C11orf87Q6NUJ2 197 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 OR52I1Q8NGK6 324 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 OR5M8Q8NGP6 311 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 OR8U1Q8NH10 309 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 MRPS24Q96EL2 167 aaKnown RBP5.65□□□□□ -1.5
USP46-208ENST00000512656 P2RX4Q99571 388 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 ABCG5Q9H222 651 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 CHCHD3Q9NX63 227 aaKnown RBP5.65□□□□□ -1.5
USP46-208ENST00000512656 TAS2R4Q9NYW5 299 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 LINC00527Q9UJ94 153 aa5.65□□□□□ -1.5
USP46-208ENST00000512656 KMT2CQ8NEZ4 4911 aaKnown RBP5.65□□□□□ -1.51
USP46-208ENST00000512656 DNAH9Q9NYC9 4486 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 IGHV3-72A0A0B4J1Y9 119 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 TRAV39A0A0B4J263 110 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 A0A1W2PPE3 182 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 MCRIP1C9JLW8 97 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 H3BNX3 289 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 ZNF561-AS1K7EIQ3 104 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 AIPO00170 330 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 GEMIN2O14893 280 aaKnown RBP5.64□□□□□ -1.51
USP46-208ENST00000512656 CA11O75493 328 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 MT-ND4P03905 459 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 ELANEP08246 267 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 LIMS3P0CW19 117 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 LIMS4P0CW20 117 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 OR5H8P0DN80 308 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 MYL12AP19105 171 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 SERPINA2P20848 420 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 VDAC1P21796 283 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 CDX1P47902 265 aaPredicted RBP5.64□□□□□ -1.51
USP46-208ENST00000512656 REG1BP48304 166 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 RIPK1Q13546 671 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 KIR2DS1Q14954 304 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 RNF151Q2KHN1 245 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 SLC22A6Q4U2R8 563 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 C6orf183Q5T699 404 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 C9orf66Q5T8R8 295 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 TRAT1Q6PIZ9 186 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 ZNF497Q6ZNH5 498 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 Q8N6K4 173 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 ZNF555Q8NEP9 628 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 RTN4IP1Q8WWV3 396 aaPredicted RBP5.64□□□□□ -1.51
USP46-208ENST00000512656 RGP1Q92546 391 aaPredicted RBP5.64□□□□□ -1.51
USP46-208ENST00000512656 ZNF503Q96F45 646 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 RAX2Q96IS3 184 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 S1PR3Q99500 378 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 CHCHD6Q9BRQ6 235 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 FGF20Q9NP95 211 aaPredicted RBP5.64□□□□□ -1.51
USP46-208ENST00000512656 BABAM2Q9NXR7 383 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 GNG12Q9UBI6 72 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 AASSQ9UDR5 926 aa5.64□□□□□ -1.51
USP46-208ENST00000512656 FAM90A10PA6NDY2 464 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 FAM90A7PA6NKC0 464 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 FAM90A23PA8MXZ1 464 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 C15orf65H3BRN8 121 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 GPX5O75715 221 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 GLAP06280 429 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 SOX6P35712 828 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 GTF2A1P52655 376 aaPredicted RBP5.63□□□□□ -1.51
USP46-208ENST00000512656 TMEM65Q6PI78 240 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 Q6ZSN1 163 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 SLC25A48Q6ZT89 311 aaKnown RBP5.63□□□□□ -1.51
USP46-208ENST00000512656 C18orf65Q6ZTR6 163 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 RNF152Q8N8N0 203 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 Q8N9W7 124 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 CCDC107Q8WV48 283 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 TFAP2CQ92754 450 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 GHSRQ92847 366 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 ST6GALNAC6Q969X2 333 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 SMIM19Q96E16 107 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 RDH12Q96NR8 316 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 ZNF184Q99676 751 aaPredicted RBP5.63□□□□□ -1.51
USP46-208ENST00000512656 DCLRE1BQ9H816 532 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 ETAA1Q9NY74 926 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 KCNIP1Q9NZI2 227 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 ZNF580Q9UK33 172 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 TRAPPC2LQ9UL33 140 aa5.63□□□□□ -1.51
USP46-208ENST00000512656 EXOSC1Q9Y3B2 195 aaKnown RBP5.63□□□□□ -1.51
USP46-208ENST00000512656 IGHV3-43A0A0B4J1X8 118 aa5.62□□□□□ -1.51
USP46-208ENST00000512656 LINC01548A6NM66 108 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms