RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 RAC3P60763 192 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 PMS2P11Q13670 270 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 RSPO1Q2MKA7 263 aaPredicted RBP10.98□□□□□ -0.65
HMGB2-205ENST00000511316 MPV17LQ2QL34 196 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 PHLDA2Q53GA4 152 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 ETV3LQ6ZN32 361 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 ZNF429Q86V71 674 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 C1orf87Q8N0U7 546 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 TMEM252Q8N6L7 170 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 OR52M1Q8NGK5 317 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 OR5D13Q8NGL4 314 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 RAB40CQ96S21 281 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 GFOD1Q9NXC2 390 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 MRPS18CQ9Y3D5 142 aaKnown RBP10.98□□□□□ -0.65
HMGB2-205ENST00000511316 FAM215AQ9Y5M1 114 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 WSB1Q9Y6I7 421 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 E9PLN8 166 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 H0Y980 276 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 CCL21O00585 134 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 PPP1R2P9O14990 202 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 AGFG2O95081 481 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 SCAF4O95104 1147 aaKnown RBP10.98□□□□□ -0.65
HMGB2-205ENST00000511316 CLDN1O95832 211 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 LCATP04180 440 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 GDF1P27539 372 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 OPRM1P35372 400 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 TAS2R30P59541 319 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 RPL23AP62750 156 aaKnown RBP10.98□□□□□ -0.65
HMGB2-205ENST00000511316 NKX6-1P78426 367 aaPredicted RBP10.98□□□□□ -0.65
HMGB2-205ENST00000511316 ID3Q02535 119 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 NHLH2Q02577 135 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 SP6Q3SY56 376 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 LBHQ53QV2 105 aaPredicted RBP10.98□□□□□ -0.65
HMGB2-205ENST00000511316 WIPI1Q5MNZ9 446 aaPredicted RBP10.98□□□□□ -0.65
HMGB2-205ENST00000511316 SEM1Q6ZVN7 128 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 YRDCQ86U90 279 aaKnown RBP10.98□□□□□ -0.65
HMGB2-205ENST00000511316 RAB39BQ96DA2 213 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 HDHD3Q9BSH5 251 aaPredicted RBP10.98□□□□□ -0.65
HMGB2-205ENST00000511316 SH3BGRL3Q9H299 93 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 ZNF442Q9H7R0 627 aa10.98□□□□□ -0.65
HMGB2-205ENST00000511316 A0A1B0GU03 582 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 HSD17B6O14756 317 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 ARG1P05089 322 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 AADACP22760 399 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 PPP1CCP36873 323 aaKnown RBP10.97□□□□□ -0.65
HMGB2-205ENST00000511316 HLA-DRB3P79483 266 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 RAET1LQ5VY80 246 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 SP5Q6BEB4 398 aaPredicted RBP10.97□□□□□ -0.65
HMGB2-205ENST00000511316 ITLN2Q8WWU7 325 aaPredicted RBP10.97□□□□□ -0.65
HMGB2-205ENST00000511316 CPNE4Q96A23 557 aaPredicted RBP10.97□□□□□ -0.65
HMGB2-205ENST00000511316 SPSB4Q96A44 273 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 VKORC1Q9BQB6 163 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 PSMG3Q9BT73 122 aaPredicted RBP10.97□□□□□ -0.65
HMGB2-205ENST00000511316 C20orf24Q9BUV8 137 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 PARD6GQ9BYG4 376 aaPredicted RBP10.97□□□□□ -0.65
HMGB2-205ENST00000511316 TMEM38BQ9NVV0 291 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 SH3BGRL2Q9UJC5 107 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 ZDHHC8Q9ULC8 765 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 CENPEQ02224 2701 aa10.97□□□□□ -0.65
HMGB2-205ENST00000511316 CSMD1Q96PZ7 3565 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 hCG_38984A0A1B0GV85 526 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 A0A1W2PPE3 182 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 GEMIN2O14893 280 aaKnown RBP10.96□□□□□ -0.65
HMGB2-205ENST00000511316 PTBP3O95758 552 aaKnown RBP10.96□□□□□ -0.65
HMGB2-205ENST00000511316 OPN1MWP04001 364 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 OPN1MW2P0DN77 364 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 OPN1MW3P0DN78 364 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 DEFA6Q01524 100 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 RBPJQ06330 500 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 ZNF674Q2M3X9 581 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 SNAI3Q3KNW1 292 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 SPSB3Q6PJ21 355 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 MEX3BQ6ZN04 569 aaKnown RBP10.96□□□□□ -0.65
HMGB2-205ENST00000511316 PINX1Q96BK5 328 aaKnown RBP10.96□□□□□ -0.65
HMGB2-205ENST00000511316 FBXO17Q96EF6 278 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 WDYHV1Q96HA8 205 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 PRDM14Q9GZV8 571 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 PARP12Q9H0J9 701 aaKnown RBP10.96□□□□□ -0.65
HMGB2-205ENST00000511316 LIME1Q9H400 295 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 CISD1Q9NZ45 108 aaKnown RBP10.96□□□□□ -0.65
HMGB2-205ENST00000511316 MMP24Q9Y5R2 645 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 CSMD2Q7Z408 3487 aa10.96□□□□□ -0.65
HMGB2-205ENST00000511316 CLDN34H7C241 214 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 PRRG2O14669 202 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 RAMP1O60894 148 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 TRAPPC6AO75865 159 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 FOSL1P15407 271 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 SRD5A2P31213 254 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 RND2P52198 227 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 DLK1P80370 383 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 SERF2P84101 59 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 RNPS1Q15287 305 aaKnown RBP10.95□□□□□ -0.66
HMGB2-205ENST00000511316 ELOBQ15370 118 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 NMSQ5H8A3 153 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 PLCXD3Q63HM9 321 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 SELENOHQ8IZQ5 122 aaKnown RBP10.95□□□□□ -0.66
HMGB2-205ENST00000511316 OR5C1Q8NGR4 320 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 CLDND2Q8NHS1 167 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 TP53RKQ96S44 253 aa10.95□□□□□ -0.66
HMGB2-205ENST00000511316 B4GALT7Q9UBV7 327 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms