RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 OR3A4PP47883 348 aa7.37□□□□□ -1.23
HTT-208ENST00000510626 PMVKQ15126 192 aa7.37□□□□□ -1.23
HTT-208ENST00000510626 PSG5Q15238 335 aa7.37□□□□□ -1.23
HTT-208ENST00000510626 MED29Q9NX70 200 aa7.37□□□□□ -1.23
HTT-208ENST00000510626 IL2RAP01589 272 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 RELBQ01201 579 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 SP6Q3SY56 376 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 ATG4DQ86TL0 474 aaPredicted RBP7.36□□□□□ -1.23
HTT-208ENST00000510626 TRAV1-1A0A0B4J248 108 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 A0A1W2PPC4 97 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 J3QW42 95 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 GZMMP51124 257 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 SRD5A3Q9H8P0 318 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 KCNE3Q9Y6H6 103 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 TNFSF11O14788 317 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 PTGER1P34995 402 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 PRICKLE4Q2TBC4 344 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 Q56UQ5 140 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 PNLIPP16233 465 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 FOXF1Q12946 379 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 SRSF5Q13243 272 aaKnown RBP7.36□□□□□ -1.23
HTT-208ENST00000510626 ANKRD34AQ69YU3 496 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 TCF24Q7RTU0 167 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 K7ESF4 209 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 SPRY1O43609 319 aaPredicted RBP7.36□□□□□ -1.23
HTT-208ENST00000510626 EMC6Q9BV81 110 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 TWSG1Q9GZX9 223 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 CEACAM3P40198 252 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 MFAP2P55001 183 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 SAMD13Q5VXD3 122 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 VSTM2LQ96N03 204 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 PCGF1Q9BSM1 259 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 DUSP13Q9UII6 198 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 SNURFLB1AK76 121 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 CIRBPQ14011 172 aaKnown RBP7.36□□□□□ -1.23
HTT-208ENST00000510626 GABRA6Q16445 453 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 CCL26Q9Y258 94 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 FCGR3BO75015 233 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 FGF8P55075 233 aaPredicted RBP7.36□□□□□ -1.23
HTT-208ENST00000510626 DOCK5Q9H7D0 1870 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 A0A1B0GV90 55 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 ZGLP1P0C6A0 271 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 SMIM14Q96QK8 99 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 TNFSF14O43557 240 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 CA7P43166 264 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 OR10J3Q5JRS4 329 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 NIT1Q86X76 327 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 KLHDC9Q8NEP7 349 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 OR4X2Q8NGF9 303 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 LOC105371267A0A1B0GV96 52 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 MISP3Q96FF7 219 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 C1RLQ9NZP8 487 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 COL16A1Q07092 1604 aaPredicted RBP7.36□□□□□ -1.23
HTT-208ENST00000510626 STRCP1A6NGW2 1772 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 SIPA1L1O43166 1804 aa7.36□□□□□ -1.23
HTT-208ENST00000510626 C1QAP02745 245 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 C10orf113Q5VZT2 155 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 ZFP64Q9NPA5 681 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 SORL1Q92673 2214 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 SH2D7A6NKC9 451 aaPredicted RBP7.35□□□□□ -1.23
HTT-208ENST00000510626 ATP6V0CP27449 155 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 OR4C3Q8NH37 302 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 SLC6A13Q9NSD5 602 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 BTAF1O14981 1849 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 TEPPQ6URK8 271 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 ISOC2Q96AB3 205 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 RASL11BQ9BPW5 248 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 IFNL4K9M1U5 179 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 GLI4P10075 376 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 ID1P41134 155 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 SHISA6Q6ZSJ9 500 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 C1QTNF9BB2RNN3 333 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 C1orf100Q5SVJ3 147 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 RFLNAQ6ZTI6 216 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 TMEFF1Q8IYR6 380 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 MBD3L1Q8WWY6 194 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 K7ESM1 405 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 CDIPTO14735 213 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 OR8B12Q8NGG6 310 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 PSG11Q9UQ72 335 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 OR11G2Q8NGC1 345 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 MRPL32Q9BYC8 188 aaKnown RBP7.35□□□□□ -1.23
HTT-208ENST00000510626 WDR13Q9H1Z4 485 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 SKP2Q13309 424 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 MLF2Q15773 248 aaPredicted RBP7.35□□□□□ -1.23
HTT-208ENST00000510626 CDKN3Q16667 212 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 VHLLQ6RSH7 139 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 PRRG2O14669 202 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 TRAV38-1A0A0B4J264 116 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 B4GALNT1Q00973 533 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 LDLRAD3Q86YD5 345 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 OR2J3O76001 311 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 TRGC2P03986 189 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 MPZP25189 248 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 FAM169BQ8N8A8 192 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 ST6GALNAC2Q9UJ37 374 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 KBTBD11O94819 623 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 CAMPP49913 170 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 ZIC1Q15915 447 aa7.35□□□□□ -1.23
HTT-208ENST00000510626 RPEQ96AT9 228 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms