RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 PLEKHJ1Q9NW61 149 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 ZNF222Q9UK12 451 aa11.91□□□□□ -0.5
HMGCL-208ENST00000509389 TRBV6-6A0A0A6YYG2 114 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 NAP1L6A6NFF2 107 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 NKX6-3A6NJ46 265 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 NAPSAO96009 420 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 SRSF7Q16629 238 aaKnown RBP eCLIP11.9□□□□□ -0.5
HMGCL-208ENST00000509389 SMIM21Q3B7S5 101 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 PLA1AQ53H76 456 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 ZNF57Q68EA5 555 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-208ENST00000509389 DHRS7BQ6IAN0 325 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-208ENST00000509389 Q6ZPA2 131 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 BATF2Q8N1L9 274 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 PNKDQ8N490 385 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 ANGPTL6Q8NI99 470 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 MED30Q96HR3 178 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 NEDD4LQ96PU5 975 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 CHST6Q9GZX3 395 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 HRASLSQ9HDD0 168 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 SLC25A10Q9UBX3 287 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-208ENST00000509389 AK3Q9UIJ7 227 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 VPREB3Q9UKI3 123 aa11.9□□□□□ -0.5
HMGCL-208ENST00000509389 BTBD17A6NE02 478 aa11.89□□□□□ -0.51
HMGCL-208ENST00000509389 SIGLEC5O15389 551 aa11.89□□□□□ -0.51
HMGCL-208ENST00000509389 GLRA1P23415 457 aa11.89□□□□□ -0.51
HMGCL-208ENST00000509389 TAS2R19P59542 299 aa11.89□□□□□ -0.51
HMGCL-208ENST00000509389 C1orf122Q6ZSJ8 110 aa11.89□□□□□ -0.51
HMGCL-208ENST00000509389 HOGA1Q86XE5 327 aa11.89□□□□□ -0.51
HMGCL-208ENST00000509389 OR4C16Q8NGL9 310 aa11.89□□□□□ -0.51
HMGCL-208ENST00000509389 C12orf4Q9NQ89 552 aa11.89□□□□□ -0.51
HMGCL-208ENST00000509389 SLC2A8Q9NY64 477 aa11.89□□□□□ -0.51
HMGCL-208ENST00000509389 NLKQ9UBE8 527 aa11.89□□□□□ -0.51
HMGCL-208ENST00000509389 OR2AT4A6NND4 320 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 M0R1W7 72 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 SLC33A1O00400 549 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-208ENST00000509389 TSPAN9O75954 239 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 OR2H2O95918 312 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 FCGR3AP08637 254 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 AKAIN1P0CW23 69 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 SPNP16150 400 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 NDUFB7P17568 137 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 SAA4P35542 130 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 INPP1P49441 399 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 UBE2E1P51965 193 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 TRIM16LQ309B1 348 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 NKAPLQ5M9Q1 402 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 MZT2BQ6NZ67 158 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 ZNF880Q6PDB4 577 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 SUMF2Q8NBJ7 301 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 FAAP24Q9BTP7 215 aa11.88□□□□□ -0.51
HMGCL-208ENST00000509389 PRKDCP78527 4128 aaKnown RBP11.88□□□□□ -0.51
HMGCL-208ENST00000509389 IGKV1D-17A0A075B6S4 117 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 MEIS3P1A6NDR6 274 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 ZNF737O75373 536 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 TSPAN15O95858 294 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 HAND1O96004 215 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 CSN2P05814 226 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 ZNF735P0CB33 412 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 GABRA2P47869 451 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 KCNJ3P48549 501 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 ARFRP1Q13795 201 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 ACTBL2Q562R1 376 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 VAX1Q5SQQ9 334 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 NCR3LG1Q68D85 454 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 STEAP1BQ6NZ63 245 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 GVQW1Q8N7I0 195 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 OR5R1Q8NH85 324 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 CMSS1Q9BQ75 279 aaKnown RBP11.87□□□□□ -0.51
HMGCL-208ENST00000509389 DPCDQ9BVM2 203 aaPredicted RBP11.87□□□□□ -0.51
HMGCL-208ENST00000509389 METTL8Q9H825 291 aaKnown RBP11.87□□□□□ -0.51
HMGCL-208ENST00000509389 MAB21L2Q9Y586 359 aa11.87□□□□□ -0.51
HMGCL-208ENST00000509389 CENPXA8MT69 81 aa11.86□□□□□ -0.51
HMGCL-208ENST00000509389 SH2D1BO14796 132 aa11.86□□□□□ -0.51
HMGCL-208ENST00000509389 CD3DP04234 171 aa11.86□□□□□ -0.51
HMGCL-208ENST00000509389 PSG2P11465 335 aa11.86□□□□□ -0.51
HMGCL-208ENST00000509389 DUSP1P28562 367 aa11.86□□□□□ -0.51
HMGCL-208ENST00000509389 FAUP35544 74 aaKnown RBP11.86□□□□□ -0.51
HMGCL-208ENST00000509389 SNU13P55769 128 aaKnown RBP11.86□□□□□ -0.51
HMGCL-208ENST00000509389 RBM39Q14498 530 aaKnown RBP11.86□□□□□ -0.51
HMGCL-208ENST00000509389 HCP5Q6MZN7 132 aa11.86□□□□□ -0.51
HMGCL-208ENST00000509389 CCBE1Q6UXH8 406 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-208ENST00000509389 ZNRF1Q8ND25 227 aa11.86□□□□□ -0.51
HMGCL-208ENST00000509389 OR4D10Q8NGI6 311 aa11.86□□□□□ -0.51
HMGCL-208ENST00000509389 HDHD3Q9BSH5 251 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-208ENST00000509389 MARVELD1Q9BSK0 173 aa11.86□□□□□ -0.51
HMGCL-208ENST00000509389 PPA2Q9H2U2 334 aa11.86□□□□□ -0.51
HMGCL-208ENST00000509389 RIMS4Q9H426 269 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-208ENST00000509389 COPZ2Q9P299 210 aa11.86□□□□□ -0.51
HMGCL-208ENST00000509389 TET2Q6N021 2002 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-208ENST00000509389 IGKV1D-8A0A087WSZ0 117 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 A0A1B0GVG6 124 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 LINC00854A0A1B0GVQ3 168 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 ZNF736B4DX44 427 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-208ENST00000509389 MCRIP1C9JLW8 97 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 PSPNO60542 156 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 MT-ND4P03905 459 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 MEF2DQ14814 521 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 ATAD3CQ5T2N8 411 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 SLC35E4Q6ICL7 350 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 ZNF497Q6ZNH5 498 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms