RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 WIPF1O43516 503 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 IGF1P05019 195 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 CTSLP07711 333 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ADRB3P13945 408 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 FBXW4P57775 412 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ERVK-16P61578 105 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 EMX2Q04743 252 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 LAMTOR1Q6IAA8 161 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 OOSP2Q86WS3 158 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ZADH2Q8N4Q0 377 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 TCTEX1D1Q8N7M0 179 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 RXFP4Q8TDU9 374 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ATXN7L3BQ96GX2 97 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 COX14Q96I36 57 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 EBF2Q9HAK2 575 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ZFP64Q9NPA5 681 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 PLSCR3Q9NRY6 295 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 FIS1Q9Y3D6 152 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 A0A1B0GU03 582 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 GAGE12BA1L429 117 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 GAGE12HA6NDE8 117 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 WIPF3A6NGB9 483 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 CRYBA1P05813 215 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 HOXA6P31267 233 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 OPRD1P41143 372 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 KLRB1Q12918 225 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 JOSD1Q15040 202 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 SBSNQ6UWP8 590 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ACP7Q6ZNF0 438 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ZCCHC23Q6ZST2 131 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 GOLT1AQ6ZVE7 132 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 DND1Q8IYX4 353 aaKnown RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 FNDC8Q8TC99 324 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 HAVCR2Q8TDQ0 301 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 SULT4A1Q9BR01 284 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 DDA1Q9BW61 102 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 TAF9BQ9HBM6 251 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 AIG1Q9NVV5 245 aa3.33□□□□□ -1.88
NEDD4-209ENST00000508871 ELF5Q9UKW6 265 aaPredicted RBP3.33□□□□□ -1.88
NEDD4-209ENST00000508871 OR51F1A6NGY5 319 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 C10orf142B7Z368 130 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 KRBOX1C9JBD0 128 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 UPK2O00526 184 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 DUS4LO95620 317 aaKnown RBP3.32□□□□□ -1.88
NEDD4-209ENST00000508871 CA5AP35218 305 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 FOLR3P41439 243 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 RPL29P47914 159 aaKnown RBP3.32□□□□□ -1.88
NEDD4-209ENST00000508871 REG1BP48304 166 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 ABHD17BQ5VST6 288 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 WDR25Q64LD2 544 aaPredicted RBP3.32□□□□□ -1.88
NEDD4-209ENST00000508871 TMEM215Q68D42 235 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 OR6X1Q8NH79 312 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 SLC35B4Q969S0 331 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 YPEL4Q96NS1 127 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 HIST1H4GQ99525 98 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 TMEM126AQ9H061 195 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 NAT8Q9UHE5 227 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 FBXL4Q9UKA2 621 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 PSG11Q9UQ72 335 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 V9GYS6 101 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 TRAV8-1A0A0A6YYK1 113 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 CA11O75493 328 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 GM2AP17900 193 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 OR1D4P47884 311 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 KLF3P57682 345 aaPredicted RBP3.32□□□□□ -1.88
NEDD4-209ENST00000508871 RPL8P62917 257 aaKnown RBP3.32□□□□□ -1.88
NEDD4-209ENST00000508871 DPPA3Q6W0C5 159 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF705AQ6ZN79 300 aaPredicted RBP3.32□□□□□ -1.88
NEDD4-209ENST00000508871 DTX1Q86Y01 620 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 GDPD1Q8N9F7 314 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 OR52L1Q8NGH7 329 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 OR5W2Q8NH69 310 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 ZNRF4Q8WWF5 429 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 GINS3Q9BRX5 216 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 SH2D2AQ9NP31 389 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 TINAGQ9UJW2 476 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 DUXBA0A1W2PPF3 345 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 H7C1H1 209 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 TAPBPO15533 448 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 LYZL6O75951 148 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 IGLV3-19P01714 112 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 GP1BAP07359 652 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 METTL15P1P0C7V9 234 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 CD1EP15812 388 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 CTLA4P16410 223 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 CDKN1AP38936 164 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 YBX1P67809 324 aaKnown RBP3.32□□□□□ -1.88
NEDD4-209ENST00000508871 ADAMTSL5Q6ZMM2 481 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 GVQW1Q8N7I0 195 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 TEX45Q8NA69 505 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 FGF13Q92913 245 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 NTNG2Q96CW9 530 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 RASL11BQ9BPW5 248 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 EMC6Q9BV81 110 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 WSB1Q9Y6I7 421 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 PRSS21Q9Y6M0 314 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 IRGMA1A4Y4 181 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 CLDN14O95500 239 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 IGFBP2P18065 325 aa3.32□□□□□ -1.88
NEDD4-209ENST00000508871 RCC1P18754 421 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms