RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 P2RX3P56373 397 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 CLDN12P56749 244 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 RPL31P62899 125 aaKnown RBP4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 PITPNAQ00169 270 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 SCN1BQ07699 218 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 GRK1Q15835 563 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 PNLIPRP3Q17RR3 467 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 TMEM30BQ3MIR4 351 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 PIGYQ3MUY2 71 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 UBE2NLQ5JXB2 153 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 ATAD3CQ5T2N8 411 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 SUMO4Q6EEV6 95 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 SLC35E4Q6ICL7 350 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 TRAT1Q6PIZ9 186 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 C17orf107Q6ZR85 190 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 Q6ZTK2 550 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 GLCCI1Q86VQ1 547 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 GAPTQ8N292 157 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 KIR3DL3Q8N743 410 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 FAM216BQ8N7L0 139 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 SUMF2Q8NBJ7 301 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 LY6G5BQ8NDX9 201 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 C19orf18Q8NEA5 215 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR4M2Q8NGB6 313 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR10A7Q8NGE5 316 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR10R2Q8NGX6 335 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 DYNC2LI1Q8TCX1 351 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 ST8SIA4Q92187 359 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 CORO2AQ92828 525 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 TMEM186Q96B77 213 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 MSI2Q96DH6 328 aaKnown RBP4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 RAB3CQ96E17 227 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 SEH1LQ96EE3 360 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 S100A16Q96FQ6 103 aaKnown RBP4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 RITA1Q96K30 269 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 MMP27Q9H306 513 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 BANF2Q9H503 90 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 NARFLQ9H6Q4 476 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 PLEKHJ1Q9NW61 149 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 RHBDL2Q9NX52 303 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 TAS2R3Q9NYW6 316 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR6C3Q9NZP0 311 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 CTSZQ9UBR2 303 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 OPN4Q9UHM6 478 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 RPUSD1Q9UJJ7 312 aaKnown RBP4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 PEX16Q9Y5Y5 336 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 KPTNQ9Y664 436 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 LINC00312Q9Y6C7 94 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 TRGV10A0A0A0MS01 117 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 IGHV2-70DA0A0C4DH43 119 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A1W2PP11 408 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 TMEM30CPA0ZSE6 113 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 SMIM30A4D0T7 59 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNF729A6NN14 1252 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 NPIPB5A8MRT5 1133 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 FOXI3A8MTJ6 420 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 SIRPB1O00241 398 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 XRCC3O43542 346 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 ORC5O43913 435 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 CLPXO76031 633 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 PAHP00439 452 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 TGFAP01135 160 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 HIST1H1DP16402 221 aaKnown RBP4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 IL2RGP31785 369 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 TGFBR1P36897 503 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 TALDO1P37837 337 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 MNDAP41218 407 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 VEGFCP49767 419 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 SNU13P55769 128 aaKnown RBP4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 TMEM50BP56557 158 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 EDDM3BP56851 147 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 BPIFB3P59826 476 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 LCN2P80188 198 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 MRPS15P82914 257 aaKnown RBP4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 PAX2Q02962 417 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 PAX8Q06710 450 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 SCGB2A2Q13296 93 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 SPCS2Q15005 226 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 SRSF7Q16629 238 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 AWAT1Q58HT5 328 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 KRBOX4Q5JUW0 171 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 C6orf183Q5T699 404 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 DCAF12L2Q5VW00 463 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 RSBN1Q5VWQ0 802 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 SIGIRRQ6IA17 410 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR52W1Q6IF63 320 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR10K2Q6IF99 312 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 BAIAP2L2Q6UXY1 529 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNF66Q6ZN08 573 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNF497Q6ZNH5 498 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 LINC00299Q6ZSB3 139 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 BTN2A1Q7KYR7 527 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 MOB1BQ7L9L4 216 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 BATF2Q8N1L9 274 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR4S1Q8NGB4 309 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 NDNFQ8TB73 568 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 LGALS14Q8TCE9 139 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 NEK7Q8TDX7 302 aa4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 H1FXQ92522 213 aaKnown RBP4.5□□□□□ -1.69
HMGB1P44-201ENST00000508597 NKX3-1Q99801 234 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms