RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SLC25A48Q6ZT89 311 aaKnown RBP6.9□□□□□ -1.3
PDGFC-205ENST00000506880 ABHD12Q8N2K0 398 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 OR13A1Q8NGR1 328 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 LHX4Q969G2 390 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 AKR1E2Q96JD6 320 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 SMR3AQ99954 134 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 RNF167Q9H6Y7 350 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 AUNIPQ9H7T9 357 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 CHMP1AQ9HD42 196 aaPredicted RBP6.9□□□□□ -1.3
PDGFC-205ENST00000506880 TAS2R8Q9NYW2 309 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 AK3Q9UIJ7 227 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 ANAPC10Q9UM13 185 aa6.9□□□□□ -1.3
PDGFC-205ENST00000506880 NF1P21359 2839 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 UBE2QL1A1L167 161 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 C12orf77C9JDV5 145 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 J3QR06 171 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 M0QZK8 103 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 SDCBPO00560 298 aaPredicted RBP6.89□□□□□ -1.31
PDGFC-205ENST00000506880 HSPB6O14558 160 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 FABP7O15540 132 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 LANCL1O43813 399 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 CLEC2LP0C7M8 214 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 CCL3L1P16619 93 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 PRSS3P35030 304 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 SAA4P35542 130 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 ARPC4P59998 168 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 HABP2Q14520 560 aaPredicted RBP6.89□□□□□ -1.31
PDGFC-205ENST00000506880 PYHIN1Q6K0P9 492 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 HCP5Q6MZN7 132 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 OR8H1Q8NGG4 311 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 MRGPRDQ8TDS7 321 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 SLIRPQ9GZT3 109 aaKnown RBP6.89□□□□□ -1.31
PDGFC-205ENST00000506880 OR2S2Q9NQN1 319 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 ZNRD1Q9P1U0 126 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 GNG12Q9UBI6 72 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 KCNK7Q9Y2U2 307 aa6.89□□□□□ -1.31
PDGFC-205ENST00000506880 TRBV6-7A0A0A0MS04 114 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 PIGBOS1A0A0B4J2F0 54 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 CCDC160A6NGH7 325 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 BUB1B-PAK6H3BSN5 160 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 RAB29O14966 203 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 GAPDHP04406 335 aaKnown RBP6.88□□□□□ -1.31
PDGFC-205ENST00000506880 ARG1P05089 322 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 RNASE1P07998 156 aaKnown RBP6.88□□□□□ -1.31
PDGFC-205ENST00000506880 IGHV4-38-2P0DP08 117 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 GNB3P16520 340 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 RCVRNP35243 200 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 ETV6P41212 452 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 ECI1P42126 302 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 EFNB2P52799 333 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 SPCS2Q15005 226 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 LRRC75BQ2VPJ9 315 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 MORN2Q502X0 79 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 HOGA1Q86XE5 327 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 BATF2Q8N1L9 274 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 PNKDQ8N490 385 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 ZBTB34Q8NCN2 500 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 OR2AK2Q8NG84 335 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 OR4P4Q8NGL7 312 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 OR5H6Q8NGV6 325 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 OR10X1Q8NGY0 326 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 OR4K15Q8NH41 348 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 OR10J5Q8NHC4 309 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 NDNFQ8TB73 568 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 DYRK2Q92630 601 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 ADTRPQ96IZ2 230 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 S1PR3Q99500 378 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 RNF5Q99942 180 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 NAA50Q9GZZ1 169 aaKnown RBP6.88□□□□□ -1.31
PDGFC-205ENST00000506880 RANBP3Q9H6Z4 567 aaPredicted RBP6.88□□□□□ -1.31
PDGFC-205ENST00000506880 SIRT7Q9NRC8 400 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 COMMD3Q9UBI1 195 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 ZNF69Q9UC07 566 aa6.88□□□□□ -1.31
PDGFC-205ENST00000506880 TRAV18A0A075B6X5 111 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 MEIOCA2RUB1 952 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 LY6LH3BQJ8 138 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 GABARAPH6UMI1 98 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 ST8SIA5O15466 376 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 HSPA12AO43301 675 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 GSTZ1O43708 216 aaPredicted RBP6.87□□□□□ -1.31
PDGFC-205ENST00000506880 RBBP9O75884 186 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 RCC1P18754 421 aaPredicted RBP6.87□□□□□ -1.31
PDGFC-205ENST00000506880 CD1BP29016 333 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 MC5RP33032 325 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 SSTR5P35346 364 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 IER3P46695 156 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 TAS2R20P59543 309 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 AP3S2P59780 193 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 MOGAT2Q3SYC2 334 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 SPANXN2Q5MJ10 180 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 LPCAT3Q6P1A2 487 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 FGFRL1Q8N441 504 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 TCTEX1D1Q8N7M0 179 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 TPRX1Q8N7U7 411 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 ZNF439Q8NDP4 499 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 BEST4Q8NFU0 473 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 OR5AP2Q8NGF4 316 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 MCFD2Q8NI22 146 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 GPX8Q8TED1 209 aa6.87□□□□□ -1.31
PDGFC-205ENST00000506880 GIMAP1Q8WWP7 306 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms