RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 KCTD7Q96MP8 289 aa14.29□□□□□ -0.12
SMN1-204ENST00000506163 TRBV6-6A0A0A6YYG2 114 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 FAM90A9PA6NNJ1 464 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 SMIM18P0DKX4 95 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 CEACAM3P40198 252 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 BLCAPP62952 87 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 MADCAM1Q13477 382 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 MORN2Q502X0 79 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 TRAT1Q6PIZ9 186 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 SLC25A48Q6ZT89 311 aaKnown RBP14.28□□□□□ -0.12
SMN1-204ENST00000506163 ZNF554Q86TJ5 538 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 DRAM1Q8N682 238 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 OR56B1Q8NGI3 324 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 OR10X1Q8NGY0 326 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 CFHR4Q92496 578 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 TOMM40LQ969M1 308 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 ST6GALNAC6Q969X2 333 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 RPEQ96AT9 228 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 OCSTAMPQ9BR26 566 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 ZNF702PQ9H963 129 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 OR2S2Q9NQN1 319 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 KCNIP1Q9NZI2 227 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 GNG12Q9UBI6 72 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 DAPK2Q9UIK4 370 aa14.28□□□□□ -0.12
SMN1-204ENST00000506163 OOSP1A8MZH6 123 aa14.27□□□□□ -0.12
SMN1-204ENST00000506163 TIMM23O14925 209 aa14.27□□□□□ -0.12
SMN1-204ENST00000506163 SNRPBP14678 240 aaKnown RBP14.27□□□□□ -0.12
SMN1-204ENST00000506163 RAB6AP20340 208 aa14.27□□□□□ -0.12
SMN1-204ENST00000506163 PPP1CCP36873 323 aaKnown RBP14.27□□□□□ -0.12
SMN1-204ENST00000506163 KIR2DS4P43632 304 aa14.27□□□□□ -0.12
SMN1-204ENST00000506163 REG1BP48304 166 aa14.27□□□□□ -0.12
SMN1-204ENST00000506163 HABP2Q14520 560 aaPredicted RBP14.27□□□□□ -0.12
SMN1-204ENST00000506163 SFXN4Q6P4A7 337 aa14.27□□□□□ -0.12
SMN1-204ENST00000506163 SHISA2Q6UWI4 295 aa14.27□□□□□ -0.12
SMN1-204ENST00000506163 OR10R2Q8NGX6 335 aa14.27□□□□□ -0.12
SMN1-204ENST00000506163 RAB18Q9NP72 206 aa14.27□□□□□ -0.12
SMN1-204ENST00000506163 AMMECR1Q9Y4X0 333 aaPredicted RBP14.27□□□□□ -0.12
SMN1-204ENST00000506163 GNB3P16520 340 aa14.26□□□□□ -0.13
SMN1-204ENST00000506163 BRS3P32247 399 aa14.26□□□□□ -0.13
SMN1-204ENST00000506163 HTD2P86397 168 aa14.26□□□□□ -0.13
SMN1-204ENST00000506163 Q3ZCU0 254 aa14.26□□□□□ -0.13
SMN1-204ENST00000506163 OR56B4Q8NH76 319 aa14.26□□□□□ -0.13
SMN1-204ENST00000506163 PTX4Q96A99 478 aa14.26□□□□□ -0.13
SMN1-204ENST00000506163 CHMP1AQ9HD42 196 aaPredicted RBP14.26□□□□□ -0.13
SMN1-204ENST00000506163 Q9N2K0 584 aa14.26□□□□□ -0.13
SMN1-204ENST00000506163 PITPNC1Q9UKF7 332 aa14.26□□□□□ -0.13
SMN1-204ENST00000506163 ELF5Q9UKW6 265 aaPredicted RBP14.26□□□□□ -0.13
SMN1-204ENST00000506163 MFNGO00587 321 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 HSD17B6O14756 317 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 AMY1AP04745 511 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 AMY2AP04746 511 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 RANBP1P43487 201 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 LSM3P62310 102 aaKnown RBP14.25□□□□□ -0.13
SMN1-204ENST00000506163 ZNF816Q0VGE8 651 aaPredicted RBP14.25□□□□□ -0.13
SMN1-204ENST00000506163 TMEM30BQ3MIR4 351 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 CCDC144NLQ6NUI1 221 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 Q8N2B8 174 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 OR5H6Q8NGV6 325 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 SETD6Q8TBK2 473 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 GALMQ96C23 342 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 RAB3CQ96E17 227 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 CITED1Q99966 193 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 NPFFR1Q9GZQ6 430 aa14.25□□□□□ -0.13
SMN1-204ENST00000506163 PARP12Q9H0J9 701 aaKnown RBP14.25□□□□□ -0.13
SMN1-204ENST00000506163 RIMS4Q9H426 269 aaPredicted RBP14.25□□□□□ -0.13
SMN1-204ENST00000506163 RANBP3Q9H6Z4 567 aaPredicted RBP14.25□□□□□ -0.13
SMN1-204ENST00000506163 SNRNP70P08621 437 aaKnown RBP14.24□□□□□ -0.13
SMN1-204ENST00000506163 SCTP09683 121 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 MNDAP41218 407 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 RAB7AP51149 207 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 HIST2H2BDQ6DRA6 164 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 THNSL2Q86YJ6 484 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 ODF3L1Q8IXM7 274 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 OR4C13Q8NGP0 309 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 LGALS14Q8TCE9 139 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 RBM14Q96PK6 669 aaKnown RBP14.24□□□□□ -0.13
SMN1-204ENST00000506163 CMSS1Q9BQ75 279 aaKnown RBP14.24□□□□□ -0.13
SMN1-204ENST00000506163 RAB9BQ9NP90 201 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 C12orf4Q9NQ89 552 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 SERTAD4Q9NUC0 356 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 JPT1Q9UK76 154 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 CMYA5Q8N3K9 4069 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 A0A075B6Q4 140 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 IGHV3-72A0A0B4J1Y9 119 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 IGHV1-3A0A0C4DH29 117 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 IGKV1-6A0A0C4DH72 117 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 AIREO43918 545 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 YPEL1O60688 119 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 HIST1H1DP16402 221 aaKnown RBP14.24□□□□□ -0.13
SMN1-204ENST00000506163 ZNF137PP52743 207 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 STEAP3Q658P3 488 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 OR8H3Q8N146 312 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 CAPSLQ8WWF8 208 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 RTN4IP1Q8WWV3 396 aaPredicted RBP14.24□□□□□ -0.13
SMN1-204ENST00000506163 IL1F10Q8WWZ1 152 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 YPEL2Q96QA6 119 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 ATG5Q9H1Y0 275 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 VCX3AQ9NNX9 186 aa14.24□□□□□ -0.13
SMN1-204ENST00000506163 FBN3Q75N90 2809 aa14.23□□□□□ -0.13
SMN1-204ENST00000506163 PKD1L1Q8TDX9 2849 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms