RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 HBZP02008 142 aa16.42■□□□□ 0.22
SQSTM1-210ENST00000506042 SLC2A2P11168 524 aaPredicted RBP16.42■□□□□ 0.22
SQSTM1-210ENST00000506042 TMEM267Q0VDI3 215 aaPredicted RBP16.42■□□□□ 0.22
SQSTM1-210ENST00000506042 YIF1BQ5BJH7 314 aa16.42■□□□□ 0.22
SQSTM1-210ENST00000506042 CDH26Q8IXH8 852 aa16.42■□□□□ 0.22
SQSTM1-210ENST00000506042 JAGN1Q8N5M9 183 aa16.42■□□□□ 0.22
SQSTM1-210ENST00000506042 ISYNA1Q9NPH2 558 aa16.42■□□□□ 0.22
SQSTM1-210ENST00000506042 JPT1Q9UK76 154 aa16.42■□□□□ 0.22
SQSTM1-210ENST00000506042 DNAH3Q8TD57 4116 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 TRAV41A0A0B4J266 112 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 LOC100130705A0A1B0GUX0 176 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 NBR2O15453 112 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 GABRB1P18505 474 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 GTF2A1P52655 376 aaPredicted RBP16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 GABPB1Q06547 395 aaPredicted RBP16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 Q499Y3 187 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 AWAT2Q6E213 333 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 PYHIN1Q6K0P9 492 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 OR10V1Q8NGI7 309 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 OR4K15Q8NH41 348 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 UBALD1Q8TB05 177 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 ABHD14AQ9BUJ0 271 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 FGF20Q9NP95 211 aaPredicted RBP16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 ABRACLQ9P1F3 81 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 EXOSC1Q9Y3B2 195 aaKnown RBP16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 PEX16Q9Y5Y5 336 aa16.41■□□□□ 0.22
SQSTM1-210ENST00000506042 DYNC1I1O14576 645 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 F2RL1P55085 397 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 ACTBP60709 375 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 PLGLAQ15195 96 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 NKAPLQ5M9Q1 402 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 LIN54Q6MZP7 749 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 ZNF491Q8N8L2 437 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 ZNF439Q8NDP4 499 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 GALMQ96C23 342 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 RCHY1Q96PM5 261 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 BABAM2Q9NXR7 383 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 RCC2Q9P258 522 aaKnown RBP16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 STEAP1Q9UHE8 339 aa16.4■□□□□ 0.22
SQSTM1-210ENST00000506042 OR8U9P0C7N5 309 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 LYL1P12980 280 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 FUT3P21217 361 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 RAB9AP51151 201 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 TAS2R43P59537 309 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 CT45A1Q5HYN5 189 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 NKAIN3Q8N8D7 197 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 OR2AK2Q8NG84 335 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 CT45A3Q8NHU0 189 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 MYOZ3Q8TDC0 251 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 FLYWCH2Q96CP2 140 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 OR4C12Q96R67 309 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 TAF9BQ9HBM6 251 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 WSB1Q9Y6I7 421 aa16.39■□□□□ 0.21
SQSTM1-210ENST00000506042 ZNF736B4DX44 427 aaPredicted RBP16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 I3L521 148 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 ATP6V0E1O15342 81 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 GPX5O75715 221 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 LIMS3P0CW19 117 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 LIMS4P0CW20 117 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 FSTP19883 344 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 MAPK3P27361 379 aaPredicted RBP16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 HTD2P86397 168 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 PITPNAQ00169 270 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 MORN2Q502X0 79 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 FAM71F2Q6NXP2 309 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 GLIPR1L1Q6UWM5 242 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 ABHD5Q8WTS1 349 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 RGP1Q92546 391 aaPredicted RBP16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 ELOVL1Q9BW60 279 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 SELENOIQ9C0D9 397 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 GHRLQ9UBU3 117 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 AASSQ9UDR5 926 aa16.38■□□□□ 0.21
SQSTM1-210ENST00000506042 LINC01619G3V211 115 aa16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 SLC31A2O15432 143 aa16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 CRTAPO75718 401 aaPredicted RBP16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 IGLV1-40P01703 118 aa16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 PPIFP30405 207 aaKnown RBP16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 CAPGP40121 348 aa16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 C5orf64Q2M2E5 130 aa16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 ZNF660Q6AZW8 331 aaPredicted RBP16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 MUL1Q969V5 352 aa16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 RDH12Q96NR8 316 aa16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 PIPOXQ9P0Z9 390 aa16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 FOXA2Q9Y261 457 aaPredicted RBP16.37■□□□□ 0.21
SQSTM1-210ENST00000506042 OGG1O15527 345 aa16.36■□□□□ 0.21
SQSTM1-210ENST00000506042 YPEL1O60688 119 aa16.36■□□□□ 0.21
SQSTM1-210ENST00000506042 MGMTP16455 207 aa16.36■□□□□ 0.21
SQSTM1-210ENST00000506042 MC5RP33032 325 aa16.36■□□□□ 0.21
SQSTM1-210ENST00000506042 LY6G6FQ5SQ64 297 aa16.36■□□□□ 0.21
SQSTM1-210ENST00000506042 CASC10Q5T4H9 136 aa16.36■□□□□ 0.21
SQSTM1-210ENST00000506042 OR1L1Q8NH94 360 aa16.36■□□□□ 0.21
SQSTM1-210ENST00000506042 GHSRQ92847 366 aa16.36■□□□□ 0.21
SQSTM1-210ENST00000506042 NEDD4LQ96PU5 975 aa16.36■□□□□ 0.21
SQSTM1-210ENST00000506042 YPEL2Q96QA6 119 aa16.36■□□□□ 0.21
SQSTM1-210ENST00000506042 OR5B12Q96R08 314 aa16.36■□□□□ 0.21
SQSTM1-210ENST00000506042 A0A1W2PN81 502 aa16.35■□□□□ 0.21
SQSTM1-210ENST00000506042 SC5DO75845 299 aa16.35■□□□□ 0.21
SQSTM1-210ENST00000506042 MAS1P04201 325 aa16.35■□□□□ 0.21
SQSTM1-210ENST00000506042 IGFBP3P17936 291 aaPredicted RBP16.35■□□□□ 0.21
SQSTM1-210ENST00000506042 CHRNA7P36544 502 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms