RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 SDC2P34741 201 aa20.27■□□□□ 0.84
PVT1-201ENST00000504719 VEGFCP49767 419 aa20.27■□□□□ 0.84
PVT1-201ENST00000504719 SLC16A12Q6ZSM3 486 aa20.27■□□□□ 0.84
PVT1-201ENST00000504719 OCSTAMPQ9BR26 566 aa20.27■□□□□ 0.84
PVT1-201ENST00000504719 PLEKHJ1Q9NW61 149 aa20.27■□□□□ 0.84
PVT1-201ENST00000504719 RAB22AQ9UL26 194 aa20.27■□□□□ 0.84
PVT1-201ENST00000504719 NOTOA8MTQ0 251 aa20.26■□□□□ 0.83
PVT1-201ENST00000504719 C12orf77C9JDV5 145 aa20.26■□□□□ 0.83
PVT1-201ENST00000504719 RCC1P18754 421 aaPredicted RBP20.26■□□□□ 0.83
PVT1-201ENST00000504719 MNDAP41218 407 aa20.26■□□□□ 0.83
PVT1-201ENST00000504719 VDAC2P45880 294 aaPredicted RBP20.26■□□□□ 0.83
PVT1-201ENST00000504719 ARSJQ5FYB0 599 aaPredicted RBP20.26■□□□□ 0.83
PVT1-201ENST00000504719 C6orf183Q5T699 404 aa20.26■□□□□ 0.83
PVT1-201ENST00000504719 MRPL30Q8TCC3 161 aaKnown RBP20.26■□□□□ 0.83
PVT1-201ENST00000504719 RPEQ96AT9 228 aa20.26■□□□□ 0.83
PVT1-201ENST00000504719 YIPF6Q96EC8 236 aa20.26■□□□□ 0.83
PVT1-201ENST00000504719 AKR1E2Q96JD6 320 aa20.26■□□□□ 0.83
PVT1-201ENST00000504719 RBM14Q96PK6 669 aaKnown RBP20.26■□□□□ 0.83
PVT1-201ENST00000504719 SLC25A33Q9BSK2 321 aa20.26■□□□□ 0.83
PVT1-201ENST00000504719 FBXO24O75426 580 aa20.25■□□□□ 0.83
PVT1-201ENST00000504719 OR2F2O95006 317 aa20.25■□□□□ 0.83
PVT1-201ENST00000504719 CD28P10747 220 aa20.25■□□□□ 0.83
PVT1-201ENST00000504719 MXD1Q05195 221 aa20.25■□□□□ 0.83
PVT1-201ENST00000504719 TMEM95Q3KNT9 176 aa20.25■□□□□ 0.83
PVT1-201ENST00000504719 TIMM50Q3ZCQ8 353 aa20.25■□□□□ 0.83
PVT1-201ENST00000504719 TOMM40LQ969M1 308 aa20.25■□□□□ 0.83
PVT1-201ENST00000504719 FOXI3A8MTJ6 420 aaPredicted RBP20.24■□□□□ 0.83
PVT1-201ENST00000504719 SDCBPO00560 298 aaPredicted RBP20.24■□□□□ 0.83
PVT1-201ENST00000504719 SPINT2O43291 252 aa20.24■□□□□ 0.83
PVT1-201ENST00000504719 PEX14O75381 377 aa20.24■□□□□ 0.83
PVT1-201ENST00000504719 CLEC2LP0C7M8 214 aa20.24■□□□□ 0.83
PVT1-201ENST00000504719 GNG10P50151 68 aa20.24■□□□□ 0.83
PVT1-201ENST00000504719 TMEM50BP56557 158 aa20.24■□□□□ 0.83
PVT1-201ENST00000504719 PRR18Q8N4B5 295 aa20.24■□□□□ 0.83
PVT1-201ENST00000504719 OR56B1Q8NGI3 324 aa20.24■□□□□ 0.83
PVT1-201ENST00000504719 CAPSLQ8WWF8 208 aa20.24■□□□□ 0.83
PVT1-201ENST00000504719 MBNL3Q9NUK0 354 aaKnown RBP20.24■□□□□ 0.83
PVT1-201ENST00000504719 DAPK2Q9UIK4 370 aa20.24■□□□□ 0.83
PVT1-201ENST00000504719 FAM90A9PA6NNJ1 464 aa20.23■□□□□ 0.83
PVT1-201ENST00000504719 SMIM18P0DKX4 95 aa20.23■□□□□ 0.83
PVT1-201ENST00000504719 SFXN4Q6P4A7 337 aa20.23■□□□□ 0.83
PVT1-201ENST00000504719 TRAT1Q6PIZ9 186 aa20.23■□□□□ 0.83
PVT1-201ENST00000504719 THNSL2Q86YJ6 484 aa20.23■□□□□ 0.83
PVT1-201ENST00000504719 ARHGAP5-AS1Q96IT6 56 aa20.23■□□□□ 0.83
PVT1-201ENST00000504719 TAF9BQ9HBM6 251 aa20.23■□□□□ 0.83
PVT1-201ENST00000504719 RAB9BQ9NP90 201 aa20.23■□□□□ 0.83
PVT1-201ENST00000504719 HSF4Q9ULV5 492 aa20.23■□□□□ 0.83
PVT1-201ENST00000504719 IGHV3-43A0A0B4J1X8 118 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 AIREO43918 545 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 HBZP02008 142 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 IGHV3-43DP0DP04 118 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 RAB6AP20340 208 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 MADCAM1Q13477 382 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 DIAPH2-AS1Q14236 149 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 LYG1Q8N1E2 194 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 OR52M1Q8NGK5 317 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 OR1L1Q8NH94 360 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 PECRQ9BY49 303 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 CHMP1AQ9HD42 196 aaPredicted RBP20.22■□□□□ 0.83
PVT1-201ENST00000504719 KCNIP1Q9NZI2 227 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 AK3Q9UIJ7 227 aa20.22■□□□□ 0.83
PVT1-201ENST00000504719 A0A1W2PPE3 182 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 A0A1W2PPI3 338 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 AMY1AP04745 511 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 AMY2AP04746 511 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 FAM106CPP0CH98 169 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 TGFBR1P36897 503 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 RAB7AP51149 207 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 LOXL3P58215 753 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 ABCA11PQ4W5N1 156 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 PLAC9Q5JTB6 97 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 FAM53AQ6NSI3 398 aaPredicted RBP20.21■□□□□ 0.83
PVT1-201ENST00000504719 C5orf24Q7Z6I8 188 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 GFOD1Q9NXC2 390 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 PLXNB1O43157 2135 aa20.21■□□□□ 0.83
PVT1-201ENST00000504719 NAPSAO96009 420 aa20.2■□□□□ 0.82
PVT1-201ENST00000504719 LSM3P62310 102 aaKnown RBP20.2■□□□□ 0.82
PVT1-201ENST00000504719 NSUN5P1Q3KNT7 163 aa20.2■□□□□ 0.82
PVT1-201ENST00000504719 MOGAT2Q3SYC2 334 aa20.2■□□□□ 0.82
PVT1-201ENST00000504719 PDLIM3Q53GG5 364 aaPredicted RBP20.2■□□□□ 0.82
PVT1-201ENST00000504719 NDUFA11Q86Y39 141 aa20.2■□□□□ 0.82
PVT1-201ENST00000504719 OR8H3Q8N146 312 aa20.2■□□□□ 0.82
PVT1-201ENST00000504719 DRAM1Q8N682 238 aa20.2■□□□□ 0.82
PVT1-201ENST00000504719 OR10X1Q8NGY0 326 aa20.2■□□□□ 0.82
PVT1-201ENST00000504719 PTX4Q96A99 478 aa20.2■□□□□ 0.82
PVT1-201ENST00000504719 CITED2Q99967 270 aaPredicted RBP20.2■□□□□ 0.82
PVT1-201ENST00000504719 HDHD3Q9BSH5 251 aaPredicted RBP20.2■□□□□ 0.82
PVT1-201ENST00000504719 OPN1MWP04001 364 aa20.19■□□□□ 0.82
PVT1-201ENST00000504719 SNRNP70P08621 437 aaKnown RBP20.19■□□□□ 0.82
PVT1-201ENST00000504719 OPN1MW2P0DN77 364 aa20.19■□□□□ 0.82
PVT1-201ENST00000504719 OPN1MW3P0DN78 364 aa20.19■□□□□ 0.82
PVT1-201ENST00000504719 SNRPBP14678 240 aaKnown RBP20.19■□□□□ 0.82
PVT1-201ENST00000504719 Q6ZPA2 131 aa20.19■□□□□ 0.82
PVT1-201ENST00000504719 ZNF554Q86TJ5 538 aa20.19■□□□□ 0.82
PVT1-201ENST00000504719 LINC00311Q8N616 119 aa20.19■□□□□ 0.82
PVT1-201ENST00000504719 OR56B4Q8NH76 319 aa20.19■□□□□ 0.82
PVT1-201ENST00000504719 SETD6Q8TBK2 473 aa20.19■□□□□ 0.82
PVT1-201ENST00000504719 RAB3CQ96E17 227 aa20.19■□□□□ 0.82
PVT1-201ENST00000504719 GNG12Q9UBI6 72 aa20.19■□□□□ 0.82
PVT1-201ENST00000504719 SH2D7A6NKC9 451 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms