RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 A0A0G2JNJ9 132 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 NKX2-6A6NCS4 301 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 C12orf77C9JDV5 145 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 FAM90A26D6RGX4 464 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 ITGB1BP1O14713 200 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 HSD17B6O14756 317 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 PSPNO60542 156 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 PITX3O75364 302 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 ZNF737O75373 536 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 LY86O95711 162 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 CD55P08174 381 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 FAM157CP0CG43 387 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 SULT1A2P50226 295 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 TAS2R30P59541 319 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 CATR1Q13166 79 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 PRAMEF6Q5VXH4 476 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 ZNF66Q6ZN08 573 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 RPRMLQ8N4K4 120 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 CISD2Q8N5K1 135 aaKnown RBP8.23□□□□□ -1.09
COL1A1-210ENST00000504289 COMMD1Q8N668 190 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 ZNF645Q8N7E2 425 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 DMBX1Q8NFW5 382 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 IL1F10Q8WWZ1 152 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 EDARADDQ8WWZ3 215 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 ARL11Q969Q4 196 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 SMIM8Q96KF7 97 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 CXorf58Q96LI9 332 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 RAB40CQ96S21 281 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 VKORC1Q9BQB6 163 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 LPAR3Q9UBY5 353 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 FBXL17Q9UF56 701 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 Q9UFV3 132 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 CACFD1Q9UGQ2 172 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 DUSP13Q9UII6 198 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 RBM7Q9Y580 266 aaKnown RBP8.23□□□□□ -1.09
COL1A1-210ENST00000504289 BAHCC1Q9P281 2608 aa8.23□□□□□ -1.09
COL1A1-210ENST00000504289 RP1L1Q8IWN7 2480 aaPredicted RBP8.23□□□□□ -1.09
COL1A1-210ENST00000504289 ZSCAN5BA6NJL1 495 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 SCAF4O95104 1147 aaKnown RBP8.22□□□□□ -1.09
COL1A1-210ENST00000504289 SCGB1D2O95969 90 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 HBZP02008 142 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 PSG2P11465 335 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 BMP5P22003 454 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 ARHGDIBP52566 201 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 VAMP2P63027 116 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 COL10A1Q03692 680 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 FAM27E3Q08E93 113 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 ZNF266Q14584 549 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 KRBOX4Q5JUW0 171 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 ZNF826PQ6ZT77 177 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 IQCF2Q8IXL9 164 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 ZNF561Q8N587 486 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 OR2C3Q8N628 320 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 RELL2Q8NC24 303 aaPredicted RBP8.22□□□□□ -1.09
COL1A1-210ENST00000504289 OR52M1Q8NGK5 317 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 CD300LFQ8TDQ1 290 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 COQ2Q96H96 371 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 OR2V2Q96R30 315 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 GINS3Q9BRX5 216 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 FAM234AQ9H0X4 552 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 PARP11Q9NR21 331 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 MMP26Q9NRE1 261 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 LYRM2Q9NU23 88 aaPredicted RBP8.22□□□□□ -1.09
COL1A1-210ENST00000504289 TAS2R3Q9NYW6 316 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 OR6C3Q9NZP0 311 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 OR1A1Q9P1Q5 309 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 RNF7Q9UBF6 113 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 JPT1Q9UK76 154 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 GAB2Q9UQC2 676 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 RCL1Q9Y2P8 373 aaKnown RBP8.22□□□□□ -1.09
COL1A1-210ENST00000504289 AKAP13Q12802 2813 aa8.22□□□□□ -1.09
COL1A1-210ENST00000504289 ATP6V1G2-DDX39BF2Z307 99 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 TRIM77I1YAP6 450 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 K7N7A8 449 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 WRBO00258 174 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 WNT9BO14905 357 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 ADAM20O43506 726 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 IGLV2-14P01704 120 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 MUC1P15941 1255 aaPredicted RBP8.21□□□□□ -1.1
COL1A1-210ENST00000504289 TNFRSF1AP19438 455 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 GABRA2P47869 451 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 CASP6P55212 293 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 AESQ08117 197 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 FAM209AQ5JX71 171 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 RPL7L1Q6DKI1 246 aaKnown RBP8.21□□□□□ -1.1
COL1A1-210ENST00000504289 FOXRED2Q8IWF2 684 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 DRAM1Q8N682 238 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 GCSAMQ8N6F7 178 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 CD177Q8N6Q3 437 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 PCNPQ8WW12 178 aaKnown RBP8.21□□□□□ -1.1
COL1A1-210ENST00000504289 TMED6Q8WW62 240 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 RND1Q92730 232 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 SNRNP40Q96DI7 357 aaKnown RBP8.21□□□□□ -1.1
COL1A1-210ENST00000504289 SDSLQ96GA7 329 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 DMRTA2Q96SC8 542 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 HSD17B10Q99714 261 aaKnown RBP8.21□□□□□ -1.1
COL1A1-210ENST00000504289 UFSP2Q9NUQ7 469 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 STRAPQ9Y3F4 350 aaKnown RBP8.21□□□□□ -1.1
COL1A1-210ENST00000504289 WSB1Q9Y6I7 421 aa8.21□□□□□ -1.1
COL1A1-210ENST00000504289 CEP295Q9C0D2 2601 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms