RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 PTBP3O95758 552 aaKnown RBP13.97□□□□□ -0.17
COL6A1-206ENST00000498614 BCL3P20749 454 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 UCP1P25874 307 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 CLDN18P56856 261 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 HERPUD1Q15011 391 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 UNQ6494/PRO21346Q6UXR6 183 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 LINC00696Q6ZRV3 163 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 FGF23Q9GZV9 251 aaPredicted RBP13.97□□□□□ -0.17
COL6A1-206ENST00000498614 CCL28Q9NRJ3 127 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 IGKV3D-15A0A087WSY6 115 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 TNFSF12O43508 249 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 TK1P04183 234 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 MMP9P14780 707 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 VDAC1P21796 283 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 IL24Q13007 206 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 PRDX4Q13162 271 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 MPV17LQ2QL34 196 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 COLCA1Q6ZS62 124 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 C1orf87Q8N0U7 546 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 TECTBQ96PL2 329 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 HS3ST6Q96QI5 342 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 PRRG4Q9BZD6 226 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 SPRY4Q9C004 299 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 HIPK2Q9H2X6 1198 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 Q9N2K0 584 aa13.97□□□□□ -0.17
COL6A1-206ENST00000498614 A0A0G2JRQ6 117 aa13.96□□□□□ -0.17
COL6A1-206ENST00000498614 GPM6AP51674 278 aa13.96□□□□□ -0.17
COL6A1-206ENST00000498614 DPPA3Q6W0C5 159 aa13.96□□□□□ -0.17
COL6A1-206ENST00000498614 OR10G4Q8NGN3 311 aa13.96□□□□□ -0.17
COL6A1-206ENST00000498614 PRO1933Q9H354 126 aa13.96□□□□□ -0.17
COL6A1-206ENST00000498614 RYDENQ9NUL5 291 aaKnown RBP13.96□□□□□ -0.17
COL6A1-206ENST00000498614 DLL3Q9NYJ7 618 aa13.96□□□□□ -0.17
COL6A1-206ENST00000498614 ZFP92A6NM28 416 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 B4DEV8 164 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 SPINK2P20155 84 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 TMEM267Q0VDI3 215 aaPredicted RBP13.96□□□□□ -0.18
COL6A1-206ENST00000498614 OR1C1Q15619 314 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 C3AR1Q16581 482 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 ZNF295-AS1Q8N0V1 137 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 C17orf78Q8N4C9 275 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 SSX3Q99909 188 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 DDA1Q9BW61 102 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 TTTY12Q9BZ98 90 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 ZNF665Q9H7R5 613 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 IL36RNQ9UBH0 155 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 B4GALT7Q9UBV7 327 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 DMXL2Q8TDJ6 3036 aa13.96□□□□□ -0.18
COL6A1-206ENST00000498614 TRAV1-1A0A0B4J248 108 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 A0A1B0GV90 55 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 HSPB6O14558 160 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 PHOX2AO14813 284 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 SYNGR4O95473 234 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 RNF224P0DH78 156 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 PGA5P0DJD9 388 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 MDKP21741 143 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-206ENST00000498614 RND2P52198 227 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 NRN1LQ496H8 165 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 TMEM164Q5U3C3 297 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 RSG1Q9BU20 258 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 REPIN1Q9BWE0 567 aaKnown RBP13.95□□□□□ -0.18
COL6A1-206ENST00000498614 LINC00470Q9BZP3 86 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 VSIRQ9H7M9 311 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 RPRMQ9NS64 109 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 ZNF407Q9C0G0 2248 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 IGKV1-6A0A0C4DH72 117 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 A0A1B0GU03 582 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 DUXBA0A1W2PPF3 345 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 Q6ZS49 121 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 MRPL21Q7Z2W9 205 aaKnown RBP13.95□□□□□ -0.18
COL6A1-206ENST00000498614 MEGF10Q96KG7 1140 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 UFSP2Q9NUQ7 469 aa13.95□□□□□ -0.18
COL6A1-206ENST00000498614 SPTBN4Q9H254 2564 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 TUSC2O75896 110 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 NAPSAO96009 420 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 NGFP01138 241 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 BCL2P10415 239 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 IZUMO4Q1ZYL8 232 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 SLC25A24Q6NUK1 477 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 LCN15Q6UWW0 184 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 OR5D13Q8NGL4 314 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 GTF3AQ92664 365 aaKnown RBP13.94□□□□□ -0.18
COL6A1-206ENST00000498614 SNX22Q96L94 193 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 DNAJC13O75165 2243 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 CLDN34H7C241 214 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 CYB5R3P00387 301 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-206ENST00000498614 FGF8P55075 233 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-206ENST00000498614 PLGLB1Q02325 96 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 ZNF726P1Q15940 193 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 ZNF880Q6PDB4 577 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 SSX7Q7RTT5 188 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 STX12Q86Y82 276 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 H1FOOQ8IZA3 346 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-206ENST00000498614 TMEM251Q8N6I4 163 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 PACRGQ96M98 296 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-206ENST00000498614 HIST1H2BLQ99880 126 aa13.94□□□□□ -0.18
COL6A1-206ENST00000498614 CISD1Q9NZ45 108 aaKnown RBP13.94□□□□□ -0.18
COL6A1-206ENST00000498614 PTPRBP23467 1997 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 PGLYRP1O75594 196 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-206ENST00000498614 DFFBO76075 338 aa13.93□□□□□ -0.18
COL6A1-206ENST00000498614 IFNA5P01569 189 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms