RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, human

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-242	ENST00000498280	SYCE1	Q8N0S2	351 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	C17orf78	Q8N4C9	275 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	ANGPTL6	Q8NI99	470 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	DYNC2LI1	Q8TCX1	351 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	GPR119	Q8TDV5	335 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	CAPZA3	Q96KX2	299 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	EBNA1BP2	Q99848	306 aa	Known RBP	0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	ACBD6	Q9BR61	282 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	GTSF1L	Q9H1H1	148 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	ASCL3	Q9NQ33	180 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	SCML1	Q9UN30	329 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	CCL26	Q9Y258	94 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	SAMHD1	Q9Y3Z3	626 aa	Known RBP	0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	USP42	Q9H9J4	1324 aa	Known RBP	0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	TENM1	Q9UKZ4	2725 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	VPS37C	A5D8V6	355 aa	Predicted RBP	0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	ODF3B	A8MYP8	253 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280		C9J4A7	227 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	HSBP1L1	C9JCN9	74 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	MKRN2OS	H3BPM6	223 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	OVOL1	O14753	267 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	PHYH	O14832	338 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	DENR	O43583	198 aa	Known RBP	0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	CYTH3	O43739	400 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	UGT2B11	O75310	529 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	NDUFS6	O75380	124 aa	Known RBP	0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	ZNF189	O75820	626 aa	Predicted RBP	0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	SOD1	P00441	154 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	FBP1	P09467	338 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	OR4A8	P0C604	315 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280		P0DMU3	169 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	FAM231A	P0DMU4	169 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	FAM231C	P0DMU5	169 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	ORM2	P19652	201 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	BLVRB	P30043	206 aa	Predicted RBP	0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	ADORA1	P30542	326 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	KDELR2	P33947	212 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	SPAM1	P38567	509 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	PSMB3	P49720	205 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	DLX6	P56179	175 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	ACTB	P60709	375 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	ACTG1	P63261	375 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	PMS2P3	Q13401	168 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	PDK2	Q15119	407 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	MAPK14	Q16539	360 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	TMEM176B	Q3YBM2	270 aa	Predicted RBP	0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	TIMM23B	Q5SRD1	257 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	TMEM75	Q8N9X5	138 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280		Q8NDZ9	215 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	CCDC12	Q8WUD4	166 aa	Predicted RBP	0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	KLF6	Q99612	283 aa	Predicted RBP	0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	MED10	Q9BTT4	135 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	BBS2	Q9BXC9	721 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	OR52A5	Q9H2C5	316 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	C16orf95	Q9H693	158 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	NRBP2	Q9NSY0	501 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	TMEM216	Q9P0N5	145 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	HEY1	Q9Y5J3	304 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	MINOS1-NBL1	R4GNA1	71 aa		0.92	□□□□□ -2.26
RBM39-242	ENST00000498280	VWDE	Q8N2E2	1590 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	MAP3K19	Q56UN5	1328 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280		A0A0J9YX75	114 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	C19orf71	A6NCJ1	209 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	ERICH4	A6NGS2	130 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	TRPC5OS	A6NMA1	111 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	IQCF5	A8MTL0	148 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280		F5H5K5	113 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280		H3BSA7	217 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280		M0QYV0	167 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	SYNGR1	O43759	233 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	ADAP1	O75689	374 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	NPPA	P01160	153 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	NQO1	P15559	274 aa	Known RBP	0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	ZNF7	P17097	686 aa	Predicted RBP	0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	PVALB	P20472	110 aa	Predicted RBP	0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	GABRA4	P48169	554 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	STC1	P52823	247 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	DEFB103A	P81534	67 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	GTF2B	Q00403	316 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	SLAMF1	Q13291	335 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	HES1	Q14469	280 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	ZNHIT3	Q15649	155 aa	Predicted RBP	0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	MRPL51	Q4U2R6	128 aa	Known RBP	0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	ACSBG2	Q5FVE4	666 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	BLID	Q8IZY5	108 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	ATP6V1C2	Q8NEY4	427 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	OR4C16	Q8NGL9	310 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	OR5K1	Q8NHB7	308 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	PPWD1	Q96BP3	646 aa	Known RBP	0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	TAMM41	Q96BW9	452 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	MED18	Q9BUE0	208 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	C1QTNF6	Q9BXI9	259 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	UGT2B28	Q9BY64	529 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	LINC00527	Q9UJ94	153 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	MRPS16	Q9Y3D3	137 aa	Known RBP	0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	MYO5B	Q9ULV0	1848 aa		0.91	□□□□□ -2.26
RBM39-242	ENST00000498280	CLUH	O75153	1309 aa		0.9	□□□□□ -2.26
RBM39-242	ENST00000498280	PTPRJ	Q12913	1337 aa		0.9	□□□□□ -2.26
RBM39-242	ENST00000498280	ADGRB3	O60242	1522 aa		0.9	□□□□□ -2.26

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