RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 LIN7CQ9NUP9 197 aaKnown RBP7.04□□□□□ -1.28
SF3A1-210ENST00000498259 CACFD1Q9UGQ2 172 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 RALYQ9UKM9 306 aaKnown RBP7.04□□□□□ -1.28
SF3A1-210ENST00000498259 TMED3Q9Y3Q3 217 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 SPENQ96T58 3664 aaKnown RBP7.03□□□□□ -1.28
SF3A1-210ENST00000498259 CADP27708 2225 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 C3orf85A0A1B0GTC6 90 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 F2RL2O00254 374 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 PPIHO43447 177 aaKnown RBP7.03□□□□□ -1.28
SF3A1-210ENST00000498259 CD8AP01732 235 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 SOD3P08294 240 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 WNT2P09544 360 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 OR8U9P0C7N5 309 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 RPS2P15880 293 aaKnown RBP7.03□□□□□ -1.28
SF3A1-210ENST00000498259 PI3P19957 117 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 DNASE1P24855 282 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 GNRHRP30968 328 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 HERPUD1Q15011 391 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 SLC9A3R2Q15599 337 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 PHLDA2Q53GA4 152 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 SPRNQ5BIV9 151 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 ZNF695Q8IW36 515 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 LRTM2Q8N967 370 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.03□□□□□ -1.28
SF3A1-210ENST00000498259 OR11H7Q8NGC8 314 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 OR52B4Q8NGK2 314 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 OR13A1Q8NGR1 328 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 OR2T35Q8NGX2 323 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 OR8U1Q8NH10 309 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 IL22RA2Q969J5 263 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 NEIL1Q96FI4 390 aaPredicted RBP7.03□□□□□ -1.28
SF3A1-210ENST00000498259 ZNF714Q96N38 554 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 HSD17B10Q99714 261 aaKnown RBP7.03□□□□□ -1.28
SF3A1-210ENST00000498259 TMEM246Q9BRR3 403 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 NMES1Q9C002 83 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 FXYD6Q9H0Q3 95 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 LINC00574Q9H8X3 128 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 CALYQ9NYX4 217 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 KCNS2Q9ULS6 477 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 GAB2Q9UQC2 676 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 HCFC1P51610 2035 aa7.03□□□□□ -1.28
SF3A1-210ENST00000498259 DIDO1Q9BTC0 2240 aaKnown RBP7.03□□□□□ -1.28
SF3A1-210ENST00000498259 ANKHD1Q8IWZ3 2542 aaKnown RBP7.02□□□□□ -1.29
SF3A1-210ENST00000498259 IGKV1-6A0A0C4DH72 117 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 C13orf42A0A1B0GVH6 325 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 FAM25EA8MYX2 175 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 H0Y980 276 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 C19orf84I3L1E1 186 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 DVL1O14640 695 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 PHF1O43189 567 aaPredicted RBP7.02□□□□□ -1.29
SF3A1-210ENST00000498259 C1QL1O75973 258 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 ZNF205O95201 554 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 IGHV2-70P01814 119 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 RBP4P02753 201 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 RLN2P04090 185 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 F2RP25116 425 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 NUP62P37198 522 aaPredicted RBP7.02□□□□□ -1.29
SF3A1-210ENST00000498259 GPR6P46095 362 aaPredicted RBP7.02□□□□□ -1.29
SF3A1-210ENST00000498259 GPR12P47775 334 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 SMCO1Q147U7 214 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 MORN2Q502X0 79 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 FAM201AQ5SY85 155 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 ZNF66Q6ZN08 573 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 LIAT1Q6ZQX7 453 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 TBC1D26Q86UD7 250 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 FAM216BQ8N7L0 139 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 OR1L1Q8NH94 360 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 THAP6Q8TBB0 222 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 H1FXQ92522 213 aaKnown RBP7.02□□□□□ -1.29
SF3A1-210ENST00000498259 ADTRPQ96IZ2 230 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 CCL19Q99731 98 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 AIFM2Q9BRQ8 373 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 IDI2-AS1Q9NZ38 188 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 PIPOXQ9P0Z9 390 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 PRELID3BQ9Y3B1 194 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 KALRNO60229 2985 aa7.02□□□□□ -1.29
SF3A1-210ENST00000498259 PRR14LQ5THK1 2151 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 TRAV39A0A0B4J263 110 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 DBX1A6NMT0 343 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 C15orf65H3BRN8 121 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 NDUFS8O00217 210 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 HSD17B6O14756 317 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 TNFRSF13BO14836 293 aaPredicted RBP7.01□□□□□ -1.29
SF3A1-210ENST00000498259 RAB29O14966 203 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 PGLYRP1O75594 196 aaPredicted RBP7.01□□□□□ -1.29
SF3A1-210ENST00000498259 RP2O75695 350 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 LIPFP07098 398 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 OR5AC1P0C628 307 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 CXCL3P19876 107 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 COL8A2P25067 703 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 IL3RAP26951 378 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 SSTR5P35346 364 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 KIR2DS2P43631 304 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 GZMKP49863 264 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 DSCR9P59020 149 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 GNB2P62879 340 aa7.01□□□□□ -1.29
SF3A1-210ENST00000498259 TAGLNQ01995 201 aaKnown RBP7.01□□□□□ -1.29
SF3A1-210ENST00000498259 SRSF4Q08170 494 aaKnown RBP7.01□□□□□ -1.29
SF3A1-210ENST00000498259 THOC7Q6I9Y2 204 aaKnown RBP7.01□□□□□ -1.29
SF3A1-210ENST00000498259 HEPN1Q6WQI6 88 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms