RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 GINS4Q9BRT9 223 aa9.36□□□□□ -0.91
CTTN-208ENST00000498223 MS4A7Q9GZW8 240 aaPredicted RBP9.36□□□□□ -0.91
CTTN-208ENST00000498223 IGHV2-26A0A0B4J1V2 119 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 IGHV1-69DA0A0B4J2H0 117 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 CENPVL3A0A0U1RRI6 287 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 A0A1W2PPE3 182 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 RNASEK-C17orf49H0YIS7 233 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 F2RL2O00254 374 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 CRLF1O75462 422 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 IGHV1-69P01742 117 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 IGHV4-38-2P0DP08 117 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 ZBTB25P24278 435 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 RCVRNP35243 200 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 PPP1CCP36873 323 aaKnown RBP9.35□□□□□ -0.91
CTTN-208ENST00000498223 CEACAM6P40199 344 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 PRRX1P54821 245 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 DGCR2P98153 550 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 SRSF7Q16629 238 aaKnown RBP eCLIP9.35□□□□□ -0.91
CTTN-208ENST00000498223 TMEM30BQ3MIR4 351 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 IGSF11Q5DX21 431 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 STEAP3Q658P3 488 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 BRD3OSQ6XYD6 125 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 Q6ZPA2 131 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 CCDC190Q86UF4 302 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 HOGA1Q86XE5 327 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 OR52M1Q8NGK5 317 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 OR52I2Q8NH67 350 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 OR10J5Q8NHC4 309 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 GPX8Q8TED1 209 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 TMEM160Q9NX00 188 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 GFOD1Q9NXC2 390 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 ZNF69Q9UC07 566 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 ANXA10Q9UJ72 324 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 JPT1Q9UK76 154 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 NUP50Q9UKX7 468 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 RBM7Q9Y580 266 aaKnown RBP9.35□□□□□ -0.91
CTTN-208ENST00000498223 ATRQ13535 2644 aa9.35□□□□□ -0.91
CTTN-208ENST00000498223 IGKV1D-8A0A087WSZ0 117 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 GABARAPH6UMI1 98 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 NPFFO15130 113 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 CTXN2P0C2S0 81 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 SRD5A1P18405 259 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 PTBP1P26599 531 aaKnown RBP eCLIP9.34□□□□□ -0.91
CTTN-208ENST00000498223 INPP1P49441 399 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 UBE2E1P51965 193 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 LOXL3P58215 753 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 ACTBP60709 375 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 ACTG1P63261 375 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 HTD2P86397 168 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 GNMTQ14749 295 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 RUSC1-AS1Q66K80 236 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 OR5H2Q8NGV7 314 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 OR10X1Q8NGY0 326 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 OR9G1Q8NH87 305 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 ZNF596Q8TC21 504 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 TNFRSF14Q92956 283 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 LINC00574Q9H8X3 128 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 UNKLQ9H9P5 680 aaKnown RBP9.34□□□□□ -0.91
CTTN-208ENST00000498223 NECAP2Q9NVZ3 263 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 OR1A1Q9P1Q5 309 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 CDC42EP3Q9UKI2 254 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 PSG11Q9UQ72 335 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 FAM96BQ9Y3D0 163 aa9.34□□□□□ -0.91
CTTN-208ENST00000498223 SONP18583 2426 aaKnown RBP9.33□□□□□ -0.92
CTTN-208ENST00000498223 J3QR06 171 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 CTDSPLO15194 276 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 PMP2P02689 132 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 EPHA1P21709 976 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 HLA-DMAP28067 261 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 TAS2R46P59540 309 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 ZNF45Q02386 682 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 SCGB2A2Q13296 93 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 MORN2Q502X0 79 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 KLF17Q5JT82 389 aaPredicted RBP9.33□□□□□ -0.92
CTTN-208ENST00000498223 FAM53AQ6NSI3 398 aaPredicted RBP9.33□□□□□ -0.92
CTTN-208ENST00000498223 Q6ZS49 121 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 Q8N402 240 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 SMIM4Q8WVI0 70 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 S100ZQ8WXG8 99 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 C22orf15Q8WYQ4 148 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 MDFIQ99750 246 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 SOSTQ9BQB4 213 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 EHFQ9NZC4 300 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 KLK11Q9UBX7 282 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 MTFP1Q9UDX5 166 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 AMMECR1Q9Y4X0 333 aaPredicted RBP9.33□□□□□ -0.92
CTTN-208ENST00000498223 V9GYH0 126 aa9.33□□□□□ -0.92
CTTN-208ENST00000498223 ZNF736B4DX44 427 aaPredicted RBP9.32□□□□□ -0.92
CTTN-208ENST00000498223 J3QRK9 145 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 YPEL1O60688 119 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 IFNA6P05013 189 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 IL3RAP26951 378 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 HTR1DP28221 377 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 CD34P28906 385 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 SAA4P35542 130 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 ETV6P41212 452 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 BPIFB3P59826 476 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 TSPAN5P62079 268 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 HERPUD1Q15011 391 aa9.32□□□□□ -0.92
CTTN-208ENST00000498223 CDK10Q15131 360 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms