RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 HSPA12AO43301 675 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 CRLF1O75462 422 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 LPLP06858 475 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 EPHA1P21709 976 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 SAA4P35542 130 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 CBX5P45973 191 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 LGALS4P56470 323 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 LOXL3P58215 753 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 DMRTA1Q5VZB9 504 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 HOGA1Q86XE5 327 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 BEST4Q8NFU0 473 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 OR4A4PQ8NGN8 299 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 OCSTAMPQ9BR26 566 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 GFOD1Q9NXC2 390 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 PSG11Q9UQ72 335 aa9.69□□□□□ -0.86
CUX1-210ENST00000497815 A0A087X0M5 115 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 A0A0U1RQK1 487 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 MDFIC2A0A1B0GVS7 189 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 A0A1B0GX30 115 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 PAX6P26367 422 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 CEACAM6P40199 344 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 PRRX1P54821 245 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 ARPC4P59998 168 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 HTD2P86397 168 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 DGCR2P98153 550 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 HERPUD1Q15011 391 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 SRSF7Q16629 238 aaKnown RBP eCLIP9.68□□□□□ -0.861e-8■■■■■ 28.4
CUX1-210ENST00000497815 TMEM30BQ3MIR4 351 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 ZNF626Q68DY1 528 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 PYHIN1Q6K0P9 492 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 LHFPL4Q7Z7J7 247 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 OR11H6Q8NGC7 330 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 OR52M1Q8NGK5 317 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 OR52I2Q8NH67 350 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 OR9G1Q8NH87 305 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 GPX8Q8TED1 209 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 C15orf40Q8WUR7 153 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 C17orf50Q8WW18 174 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 FCAMRQ8WWV6 532 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 SNAPC3Q92966 411 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 SLC6A7Q99884 636 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 SCPEP1Q9HB40 452 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 ANXA10Q9UJ72 324 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 JPT1Q9UK76 154 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 V9GYH0 126 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 CSPG4Q6UVK1 2322 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 DSCAML1Q8TD84 2053 aa9.68□□□□□ -0.86
CUX1-210ENST00000497815 ODF3BA8MYP8 253 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 J3QR06 171 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 SLC31A2O15432 143 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 ZBTB25P24278 435 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 CD34P28906 385 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 MORN2Q502X0 79 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 MIDNQ504T8 468 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 PYDC2Q56P42 97 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 SPANXN2Q5MJ10 180 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 STEAP3Q658P3 488 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 Q6ZS49 121 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 CCDC190Q86UF4 302 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 LURAP1LQ8IV03 231 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 OR10X1Q8NGY0 326 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 OR10J5Q8NHC4 309 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 ZNF596Q8TC21 504 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 GINS4Q9BRT9 223 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 PARP12Q9H0J9 701 aaKnown RBP9.67□□□□□ -0.86
CUX1-210ENST00000497815 PTTG2Q9NZH5 202 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 KLK11Q9UBX7 282 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 FAM96BQ9Y3D0 163 aa9.67□□□□□ -0.86
CUX1-210ENST00000497815 TRBV6-7A0A0A0MS04 114 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 SULT1C2O00338 296 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 ST8SIA5O15466 376 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 YPEL1O60688 119 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 RGS11O94810 467 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 TPPPO94811 219 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 IGLV1-47P01700 117 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 PMP2P02689 132 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 FAM157CP0CG43 387 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 HLA-DMAP28067 261 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 HTR1DP28221 377 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 RCVRNP35243 200 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 ZNF134P52741 427 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 BPIFB3P59826 476 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 HLA-DRB5Q30154 266 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 DEFB112Q30KQ8 113 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 PLA1AQ53H76 456 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 CT45A1Q5HYN5 189 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 LDLRAD2Q5SZI1 272 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 ZNF439Q8NDP4 499 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 BEND2Q8NDZ0 799 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 OR2AK2Q8NG84 335 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 OR4P4Q8NGL7 312 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 CT45A3Q8NHU0 189 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 YPEL2Q96QA6 119 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 SOSTQ9BQB4 213 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 CABLES2Q9BTV7 478 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 MMP28Q9H239 520 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 RDH8Q9NYR8 311 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 RABL2AQ9UBK7 228 aaPredicted RBP9.66□□□□□ -0.86
CUX1-210ENST00000497815 RABL2BQ9UNT1 228 aa9.66□□□□□ -0.86
CUX1-210ENST00000497815 HILPDAQ9Y5L2 63 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms